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The map label for this gene is xylZ [H]

Identifier: 107022856

GI number: 107022856

Start: 1434252

End: 1435274

Strand: Reverse

Name: xylZ [H]

Synonym: Bcen_1304

Alternate gene names: 107022856

Gene position: 1435274-1434252 (Counterclockwise)

Preceding gene: 107022857

Following gene: 107022855

Centisome position: 43.56

GC content: 65.1

Gene sequence:

>1023_bases
ATGTCCAGCTACAAGATTGCATTGAATTTCGAGGACGGGGTGACCCGCTTCATCGACTGCAAGGCCGGCGAGAAAGTACT
CGACGCGGCCTTCCGCGCGAAGATCAACCTGCCGATGGATTGCGCCGACGGCGTGTGCGGTACCTGCAAGTGCCGCGCCG
AGAGCGGGCACTACGACCTCGGTGACGATTACATCGACGATGCGCTGACCGAGGACGAAAAGGACGGCGGCCTCGTGCTG
ACGTGCCAGATGGTGCCGCACAGCGACTGCGTGATCGCGGTGCCGACGTCGTCGGTCGCGTGCAAGACCGGGCAGAGCGC
TTTTGCCGCGACGGTCACGAAGGTCGAGCAGCACAACGATGCGGCCGTCGTGCTCGAACTCGACGTCGGCGCGAGCGCGC
CGGCGTTCCTGCCGGGCCAGTACGTGAACATCGGCGTGCCGGGCAGTGGCCAGCATCGCTCGTATTCGTTCTCGTCCGCG
CCGGGCGACACGAAGGTCGGATTCCTGATCAAGAAGATTCCCGGCGGGGTGATGAGCAGGTGGCTCGAATCGGCGAAACC
CGGCGACACGCTCGAACTGCACGGGCCGCTCGGCAGCTTCTACCTGCGCGACGTGCAGCGGCCGCTGCTGTTCCTTGCCG
GCGGCACGGGCCTCGCGCCGTTCCTGTCGATGCTCGAGGTGCTCGCGCGCAGCGGGTCGCAGCAGAAGGTGCACCTGATC
TACGGCGTGACGCGCGATCTCGATCTCGTGCTGGTCGATGCGATCGAAGCGGTTGCGTCGAAGCTGCCGAACTTCAGCTT
CGCGACGGTCGTTGCCGATGCGGCGTCGAACCACGCGCGCAAGGGCTGGGTCACGCAGCACATTCCGGCCGATGCGCTGA
ACGACGGCGACGTCGACGTGTATCTGTGCGGACCGCCGCCGATGGTCGATGCGGTGCGCCAGTATTTCGACGACGCAGGC
GTGAAGCCTAACAGCTTCCACTACGAGAAGTTCACTCCCAACGTCACGGCAAAGGCGGCATGA

Upstream 100 bases:

>100_bases
CAAGAAGATCGTGCTGAAGAACGACTACATCCGGCAGGTGCTCGACGTCTATCACGTCTGATGCCGTTGGTTTGCCATGA
AAGGAAGTGGAGGTGACGCG

Downstream 100 bases:

>100_bases
CCATGCAACGATTCTCCGGCAAGGTCGTCGTCGTCACTGGCGCGGCGCAGGGCATCGGCCGCGGTGTCGCGCTGCGCGCG
GCGGCCGAGGGCGGCAAGGT

Product: oxidoreductase FAD/NAD(P)-binding

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSSYKIALNFEDGVTRFIDCKAGEKVLDAAFRAKINLPMDCADGVCGTCKCRAESGHYDLGDDYIDDALTEDEKDGGLVL
TCQMVPHSDCVIAVPTSSVACKTGQSAFAATVTKVEQHNDAAVVLELDVGASAPAFLPGQYVNIGVPGSGQHRSYSFSSA
PGDTKVGFLIKKIPGGVMSRWLESAKPGDTLELHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARSGSQQKVHLI
YGVTRDLDLVLVDAIEAVASKLPNFSFATVVADAASNHARKGWVTQHIPADALNDGDVDVYLCGPPPMVDAVRQYFDDAG
VKPNSFHYEKFTPNVTAKAA

Sequences:

>Translated_340_residues
MSSYKIALNFEDGVTRFIDCKAGEKVLDAAFRAKINLPMDCADGVCGTCKCRAESGHYDLGDDYIDDALTEDEKDGGLVL
TCQMVPHSDCVIAVPTSSVACKTGQSAFAATVTKVEQHNDAAVVLELDVGASAPAFLPGQYVNIGVPGSGQHRSYSFSSA
PGDTKVGFLIKKIPGGVMSRWLESAKPGDTLELHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARSGSQQKVHLI
YGVTRDLDLVLVDAIEAVASKLPNFSFATVVADAASNHARKGWVTQHIPADALNDGDVDVYLCGPPPMVDAVRQYFDDAG
VKPNSFHYEKFTPNVTAKAA
>Mature_339_residues
SSYKIALNFEDGVTRFIDCKAGEKVLDAAFRAKINLPMDCADGVCGTCKCRAESGHYDLGDDYIDDALTEDEKDGGLVLT
CQMVPHSDCVIAVPTSSVACKTGQSAFAATVTKVEQHNDAAVVLELDVGASAPAFLPGQYVNIGVPGSGQHRSYSFSSAP
GDTKVGFLIKKIPGGVMSRWLESAKPGDTLELHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARSGSQQKVHLIY
GVTRDLDLVLVDAIEAVASKLPNFSFATVVADAASNHARKGWVTQHIPADALNDGDVDVYLCGPPPMVDAVRQYFDDAGV
KPNSFHYEKFTPNVTAKAA

Specific function: Electron transfer component of toluate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788903, Length=217, Percent_Identity=26.7281105990783, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787098, Length=233, Percent_Identity=28.755364806867, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787658, Length=249, Percent_Identity=29.3172690763052, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1790359, Length=226, Percent_Identity=26.1061946902655, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322146, Length=201, Percent_Identity=30.3482587064677, Blast_Score=90, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6323510, Length=200, Percent_Identity=27, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323552, Length=195, Percent_Identity=26.1538461538462, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36189; Mature: 36058

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYKIALNFEDGVTRFIDCKAGEKVLDAAFRAKINLPMDCADGVCGTCKCRAESGHYDL
CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCCCC
GDDYIDDALTEDEKDGGLVLTCQMVPHSDCVIAVPTSSVACKTGQSAFAATVTKVEQHND
CCHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCCHHHHHHHHHHCCCC
AAVVLELDVGASAPAFLPGQYVNIGVPGSGQHRSYSFSSAPGDTKVGFLIKKIPGGVMSR
EEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHH
WLESAKPGDTLELHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARSGSQQKVHLI
HHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
YGVTRDLDLVLVDAIEAVASKLPNFSFATVVADAASNHARKGWVTQHIPADALNDGDVDV
EECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEEE
YLCGPPPMVDAVRQYFDDAGVKPNSFHYEKFTPNVTAKAA
EECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCC
>Mature Secondary Structure 
SSYKIALNFEDGVTRFIDCKAGEKVLDAAFRAKINLPMDCADGVCGTCKCRAESGHYDL
CCEEEEEEECCCCEEEEECCCCHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCCCC
GDDYIDDALTEDEKDGGLVLTCQMVPHSDCVIAVPTSSVACKTGQSAFAATVTKVEQHND
CCHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCCHHHHHHHHHHCCCC
AAVVLELDVGASAPAFLPGQYVNIGVPGSGQHRSYSFSSAPGDTKVGFLIKKIPGGVMSR
EEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHH
WLESAKPGDTLELHGPLGSFYLRDVQRPLLFLAGGTGLAPFLSMLEVLARSGSQQKVHLI
HHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
YGVTRDLDLVLVDAIEAVASKLPNFSFATVVADAASNHARKGWVTQHIPADALNDGDVDV
EECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEEE
YLCGPPPMVDAVRQYFDDAGVKPNSFHYEKFTPNVTAKAA
EECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]