Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

Click here to switch to the map view.

The map label for this gene is 107021847

Identifier: 107021847

GI number: 107021847

Start: 319709

End: 321103

Strand: Reverse

Name: 107021847

Synonym: Bcen_0289

Alternate gene names: NA

Gene position: 321103-319709 (Counterclockwise)

Preceding gene: 107021848

Following gene: 107021846

Centisome position: 9.75

GC content: 50.47

Gene sequence:

>1395_bases
ATGATAGAAAATCTTTTCATGAGCGTCGGGGCAATGAAGGCGTCGACATCGTGGCTTTATACACAACTGAAAGACCACAG
CGACATCTATTTTCCACCTCAAAAGGAAATTCATTATTTCTCGCATGTACGTCAGCAATGCGACTTCGAGTCACGGGACA
ATCGAGTCCGCGCACTAGCTTCCTATCTCGATCAGCAGAACGGCTACCCGGGTGACTTTGTGGAAGACAACGTTACTGAT
TTCAAATGGTTTGGACGGTATGCTGCTCAGCACGAAGTTGATGATCGATGGTATCAATCACTGTATCAGGATTCCGGGAC
CGCAAAGTACTGCGCCGATTTTTCGAACTTGAACGGCTGCCTCGATGAGGCGGGTTGGCAGTTGGTCCGCGCCAACACCA
ATAATATTCGTGCAATCTATGTGCTACGTGATCCGCTTGAACGGGTTTGGTCACATTATAAGTTCGAGTTAGCGTGGAAC
GGACTCGCCCACGAAATTTCGCACGAATACTTTAAGCGCTTCCAAGAGACACTCGACCAAGAATGGTTCTGGAAGCACGC
ACGTTACGACGAAATCGTCAAAAATCTTAGGAGCTTTCTCGCGAACCATGAGTTGCGAATTTTCTACTTCGAAGATTTTC
GCCGGACTCCTCGGGAGGCATTGGCAAGGGTCTGCGATTTCCTCGAAATCGAGCATCAATTCCCAGCGATCGACAACGCA
AGCGACAAAGTAAATTCATCTCCGGACGTTCCGATCCCCGACGAATTCCTAGTTTATCTGGCGGACCGACTACAGCCTGT
CTATGACGAACTCGACAAGCTCGGAATCAATCATGTCGGTTGGCGTCGCCATGAACAAAGCTTGGCAGCCATTTCACGGC
GGAGCCAACGCGTAACCGCATCAGACTACTACTCCGAAGATCCGCTTGTGCTTCGAGCGTTGATCGACAAATACGAGAAA
GAGTTAAGCTCACTCGGTACGATGCTCGGAAGCAGGGCTGAGGAGATTACGAGCCTTCGACAGTTGAGCCAGAAATACGA
AAAACGCATCCTTGAACAAGATCGGATCATCTCCGATCTTAACCGCCGTGCCGCAGCATCTGACTCGACTATGTTTGAAA
CGCATGCTGCGGATTACGATGTAGCGCAGACGGCAATTGGCTCCGCATTTTCCGATCAAATCGCCATGGTTGGGAACGAG
AAAAAATTTGTTCCGGCCCCTGACGATAGGAGTGATGCTACGAAGAACGCCACCCTTATCGGTATGTCGCTCGATTCCGC
TATCACGCCGTCGGATGGCGGGCAGTTATTATCTAGTTCAAGTGTCGGTTCAGCAGGAGCAACAGGGCAAATCGTCGCGT
CAGACATTCACGGCCCGGATAGCGGCACTCCGTGA

Upstream 100 bases:

>100_bases
GAAAGTACAAACAAAAATCCGTATCACACAATACACGCTACTCGGCACAACAGATTAGTCAACTGGCGGGACTTTTCAAC
CATAAGCTGACACAACAAAA

Downstream 100 bases:

>100_bases
CCACGCCAAAGACCGACGTGTCAACGTGCTCTGTCGCGCCTAGGACATATACACTTCGACAACACGTTCCGCGCGCGATA
ATGATGCCGATCGGCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Sulfotransferase Domain Superfamily

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALASYLDQQNGYPGDFVEDNVTD
FKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGCLDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWN
GLAHEISHEYFKRFQETLDQEWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA
SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTASDYYSEDPLVLRALIDKYEK
ELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDLNRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNE
KKFVPAPDDRSDATKNATLIGMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP

Sequences:

>Translated_464_residues
MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALASYLDQQNGYPGDFVEDNVTD
FKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGCLDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWN
GLAHEISHEYFKRFQETLDQEWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA
SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTASDYYSEDPLVLRALIDKYEK
ELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDLNRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNE
KKFVPAPDDRSDATKNATLIGMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP
>Mature_464_residues
MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALASYLDQQNGYPGDFVEDNVTD
FKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGCLDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWN
GLAHEISHEYFKRFQETLDQEWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA
SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTASDYYSEDPLVLRALIDKYEK
ELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDLNRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNE
KKFVPAPDDRSDATKNATLIGMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53117; Mature: 53117

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
SYLDQQNGYPGDFVEDNVTDFKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGC
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWNGLAHEISHEYFKRFQETLDQ
HHHHCCEEEEECCCCEEEEEEEHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHH
EWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA
HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCH
SDYYSEDPLVLRALIDKYEKELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNEKKFVPAPDDRSDATKNATLI
HHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCEEE
GMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP
EEECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
SYLDQQNGYPGDFVEDNVTDFKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGC
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWNGLAHEISHEYFKRFQETLDQ
HHHHCCEEEEECCCCEEEEEEEHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHH
EWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA
HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCH
SDYYSEDPLVLRALIDKYEKELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNEKKFVPAPDDRSDATKNATLI
HHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCEEE
GMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP
EEECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA