| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
Click here to switch to the map view.
The map label for this gene is 107021583
Identifier: 107021583
GI number: 107021583
Start: 21883
End: 22170
Strand: Reverse
Name: 107021583
Synonym: Bcen_0021
Alternate gene names: NA
Gene position: 22170-21883 (Counterclockwise)
Preceding gene: 107021588
Following gene: 107021582
Centisome position: 0.67
GC content: 69.79
Gene sequence:
>288_bases ATGCTGTTCCTGAAAAATGCCGCCGGCGCGCTGCGCCGCAACCTGACCGATACCGCTCATCATGTGTTCTCCGGCCCGCA CCGCGGCTGGAAGATCGCGCTGTACGTGACGATGCTGGTCGTGCCTGGCGGCTCGCTCGCGGCGCTCGGGTTCGCATGGT TCGATCATCGCCGGCAGCGCAACGCGAAAAATGCCGCCCGCCGCACGAGCCAGCCGGCCGCGACGGAGCCGTCGACATGG CGGGCTGCCGCCGCCGAACCCGTCCCGGTGCCCGTGCGCTGCCACTGA
Upstream 100 bases:
>100_bases ATATTATTTGAGTCAACCAGTTACGACGTGCATGTTGCACTGCCGGAGACTATGTTCTGACCGATTGGCCCGCGCTGCCG GGCACCCGAGGATGTTCGCG
Downstream 100 bases:
>100_bases CGCCGCGCCGCTTCCCCTCTCCGCACTGTCCCGCCTGATCACCGGCCGCGTTCCGCGCGGCCGGCGTCGTACGCCCGTTC GCCCGCCCGTTTTCCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLFLKNAAGALRRNLTDTAHHVFSGPHRGWKIALYVTMLVVPGGSLAALGFAWFDHRRQRNAKNAARRTSQPAATEPSTW RAAAAEPVPVPVRCH
Sequences:
>Translated_95_residues MLFLKNAAGALRRNLTDTAHHVFSGPHRGWKIALYVTMLVVPGGSLAALGFAWFDHRRQRNAKNAARRTSQPAATEPSTW RAAAAEPVPVPVRCH >Mature_95_residues MLFLKNAAGALRRNLTDTAHHVFSGPHRGWKIALYVTMLVVPGGSLAALGFAWFDHRRQRNAKNAARRTSQPAATEPSTW RAAAAEPVPVPVRCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10425; Mature: 10425
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLKNAAGALRRNLTDTAHHVFSGPHRGWKIALYVTMLVVPGGSLAALGFAWFDHRRQR CEEECCHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHC NAKNAARRTSQPAATEPSTWRAAAAEPVPVPVRCH CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEC >Mature Secondary Structure MLFLKNAAGALRRNLTDTAHHVFSGPHRGWKIALYVTMLVVPGGSLAALGFAWFDHRRQR CEEECCHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHC NAKNAARRTSQPAATEPSTWRAAAAEPVPVPVRCH CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA