Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488548

Identifier: 103488548

GI number: 103488548

Start: 3221972

End: 3223138

Strand: Reverse

Name: 103488548

Synonym: Sala_3072

Alternate gene names: NA

Gene position: 3223138-3221972 (Counterclockwise)

Preceding gene: 103488549

Following gene: 103488547

Centisome position: 96.35

GC content: 64.1

Gene sequence:

>1167_bases
TTGCCAGCTTGCTGGCTTAGTCGCAGCGGGTGGGGGCCATCGGCCTTGCGCAAGGCCGATGGCCCCCACCCCAACCCCTC
CCCTAAAGGGGAGGGGCTTATGACTCTTGACGCCCAAAAGGCCTTCAGCGGCACCGTCGCGCCCGAAGGGGCGGACGTGC
TCGACGAAGCGAAGCTGACCGCGTGGATGGAAACGAATGTCGAGGGGTTCAAAGGCCCGCTGACGCAGAGCAAGTTCGCC
GGCGGCCAGTCGAACCCGACCTACAAGATCTCGTCGCCATCGGGAAATTATGTCCTGCGCCGCAAGCCCTTTGGCCCGCT
GCTCCCCTCCGCCCATGCGGTCGACCGCGAATATAAGGTGCAGGCCGGCCTCTATAAGATGGGCTTTCCCGTCGCGCGCC
AATATGGGCTTTGCACCGACGACAATGTGATCGGCAGCTGGTTCTATGTGATGGCGATGGTCGATGGGCAGACGATCTGG
GACGGGTCGATGCCCGGATCGACGCCGGAGAACCGCCGCGCGACCTATGAGGCGATGATCGACACGCTCGCCGCGCTGCA
CAAGGTCGACGTCGAGGCGGCGGGGCTGTCCGATTTCGGCAAGCCCGGCAATTATTTCGGGCGCCAGGTCGATCGCTGGA
CGAAGCAGTACAAGCTCGCCGAGACCGAGACGATGGACGAGATGGAACGGCTGATCGCCTTTCTGCCTGCCACATTGCCC
GAACAGACGCGCACCAGCGTCGTCCACGGCGATTACCGCATCGACAACATGATCTATGCCAAGGACCGGCCAGAGGTTCT
GGCGGTGCTCGACTGGGAGCTGTCGACGCTGGGCGATCCGCTCGCCGATTTCACCTATGTCGCGATGGCGTGGGTGACGG
AAAATGGCGGGCGTTCAGGGGTCATGGACCTCGACCGCGCCGCGCTCGGCATCCCCGAACTCGACGAGATGGTCCAGCGC
TATTGCGCCGCCACCGGCCGCGACGGGGTGCCCGACATGAACTGGTATTTCGCCTATAATTTCTTCCGCCTCGCCGGGAT
CATGCAGGGTATCAAGAAGCGCGTCATCGACGGCACCGCCTCGTCGGCTCATGCCAAGGCGATGTCGGAGCGCGTGCAGC
CGCTGGCCGCACGCGCGTGGGACTTTGCACGAAAGGCCGGGGCATGA

Upstream 100 bases:

>100_bases
AAGATGAAGAAGGGCGACGCCGCACGATCGGTGATCGTATTCGACCAATGATGGCGGGGCGCATCTCTTCGCCCTCCCCT
TCAGGGGAGGGCAGCGAGAC

Downstream 100 bases:

>100_bases
GCCTGTTCGACATGACCGGCCAGGTCGCGCTGATCACCGGATCGTCGCGCGGCATCGGCAAGGCGACGGCGGAAGCGATG
GCCGAACAGGGCGCGAAGGT

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPACWLSRSGWGPSALRKADGPHPNPSPKGEGLMTLDAQKAFSGTVAPEGADVLDEAKLTAWMETNVEGFKGPLTQSKFA
GGQSNPTYKISSPSGNYVLRRKPFGPLLPSAHAVDREYKVQAGLYKMGFPVARQYGLCTDDNVIGSWFYVMAMVDGQTIW
DGSMPGSTPENRRATYEAMIDTLAALHKVDVEAAGLSDFGKPGNYFGRQVDRWTKQYKLAETETMDEMERLIAFLPATLP
EQTRTSVVHGDYRIDNMIYAKDRPEVLAVLDWELSTLGDPLADFTYVAMAWVTENGGRSGVMDLDRAALGIPELDEMVQR
YCAATGRDGVPDMNWYFAYNFFRLAGIMQGIKKRVIDGTASSAHAKAMSERVQPLAARAWDFARKAGA

Sequences:

>Translated_388_residues
MPACWLSRSGWGPSALRKADGPHPNPSPKGEGLMTLDAQKAFSGTVAPEGADVLDEAKLTAWMETNVEGFKGPLTQSKFA
GGQSNPTYKISSPSGNYVLRRKPFGPLLPSAHAVDREYKVQAGLYKMGFPVARQYGLCTDDNVIGSWFYVMAMVDGQTIW
DGSMPGSTPENRRATYEAMIDTLAALHKVDVEAAGLSDFGKPGNYFGRQVDRWTKQYKLAETETMDEMERLIAFLPATLP
EQTRTSVVHGDYRIDNMIYAKDRPEVLAVLDWELSTLGDPLADFTYVAMAWVTENGGRSGVMDLDRAALGIPELDEMVQR
YCAATGRDGVPDMNWYFAYNFFRLAGIMQGIKKRVIDGTASSAHAKAMSERVQPLAARAWDFARKAGA
>Mature_387_residues
PACWLSRSGWGPSALRKADGPHPNPSPKGEGLMTLDAQKAFSGTVAPEGADVLDEAKLTAWMETNVEGFKGPLTQSKFAG
GQSNPTYKISSPSGNYVLRRKPFGPLLPSAHAVDREYKVQAGLYKMGFPVARQYGLCTDDNVIGSWFYVMAMVDGQTIWD
GSMPGSTPENRRATYEAMIDTLAALHKVDVEAAGLSDFGKPGNYFGRQVDRWTKQYKLAETETMDEMERLIAFLPATLPE
QTRTSVVHGDYRIDNMIYAKDRPEVLAVLDWELSTLGDPLADFTYVAMAWVTENGGRSGVMDLDRAALGIPELDEMVQRY
CAATGRDGVPDMNWYFAYNFFRLAGIMQGIKKRVIDGTASSAHAKAMSERVQPLAARAWDFARKAGA

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48976061, Length=318, Percent_Identity=47.7987421383648, Blast_Score=305, Evalue=5e-83,
Organism=Homo sapiens, GI211971008, Length=318, Percent_Identity=47.7987421383648, Blast_Score=305, Evalue=5e-83,
Organism=Homo sapiens, GI38505218, Length=345, Percent_Identity=35.6521739130435, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=39.1304347826087, Blast_Score=229, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42666; Mature: 42535

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPACWLSRSGWGPSALRKADGPHPNPSPKGEGLMTLDAQKAFSGTVAPEGADVLDEAKLT
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHH
AWMETNVEGFKGPLTQSKFAGGQSNPTYKISSPSGNYVLRRKPFGPLLPSAHAVDREYKV
HHHHCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHCCCHHHH
QAGLYKMGFPVARQYGLCTDDNVIGSWFYVMAMVDGQTIWDGSMPGSTPENRRATYEAMI
HHCHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH
DTLAALHKVDVEAAGLSDFGKPGNYFGRQVDRWTKQYKLAETETMDEMERLIAFLPATLP
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EQTRTSVVHGDYRIDNMIYAKDRPEVLAVLDWELSTLGDPLADFTYVAMAWVTENGGRSG
HHHHHHEEECCEEECCEEEECCCCCEEEEECCCHHHCCCHHHHHHHHHHHEEECCCCCCC
VMDLDRAALGIPELDEMVQRYCAATGRDGVPDMNWYFAYNFFRLAGIMQGIKKRVIDGTA
CCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SSAHAKAMSERVQPLAARAWDFARKAGA
CHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PACWLSRSGWGPSALRKADGPHPNPSPKGEGLMTLDAQKAFSGTVAPEGADVLDEAKLT
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHH
AWMETNVEGFKGPLTQSKFAGGQSNPTYKISSPSGNYVLRRKPFGPLLPSAHAVDREYKV
HHHHCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHCCCHHHH
QAGLYKMGFPVARQYGLCTDDNVIGSWFYVMAMVDGQTIWDGSMPGSTPENRRATYEAMI
HHCHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH
DTLAALHKVDVEAAGLSDFGKPGNYFGRQVDRWTKQYKLAETETMDEMERLIAFLPATLP
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EQTRTSVVHGDYRIDNMIYAKDRPEVLAVLDWELSTLGDPLADFTYVAMAWVTENGGRSG
HHHHHHEEECCEEECCEEEECCCCCEEEEECCCHHHCCCHHHHHHHHHHHEEECCCCCCC
VMDLDRAALGIPELDEMVQRYCAATGRDGVPDMNWYFAYNFFRLAGIMQGIKKRVIDGTA
CCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SSAHAKAMSERVQPLAARAWDFARKAGA
CHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA