Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488536

Identifier: 103488536

GI number: 103488536

Start: 3210613

End: 3211962

Strand: Reverse

Name: 103488536

Synonym: Sala_3060

Alternate gene names: NA

Gene position: 3211962-3210613 (Counterclockwise)

Preceding gene: 103488537

Following gene: 103488535

Centisome position: 96.02

GC content: 68.67

Gene sequence:

>1350_bases
ATGCCGATGACCGACATCCCCGACGTCGCCCCCTCGCCGCGCCACCCCCGTTTCGCCGACGCGATCCGTGCTTATGCGCG
CGTCGGTTGCCTCAGCTTCGGCGGCCCGGCGGGGCAGATCGCGCTGATGCACCGCGAGTTCGTCGATGAGCGCCGCTGGG
TTGACGAGGCGACCTTCCTCCACGCGCTCAATTTCTGCAACCTGCTGCCCGGCCCCGAGGCGCAGCAGCTTGCGACGTGG
ATCGGCTGGCGACTGCACGGGTTGAAGGGCGGCCTCGCGGCGGGATTGCTGTTCGTCCTTCCGGGCGCCGCCGTGATGCT
CGGCCTGTCGATGCTCTATGTCCTCGCCGCAGGGCTGGGCTGGTTCGCGGCGCTGTTCCTCGGCATCAAGGCGGCGGTGC
TCGCGATCGTCGTGCAGGCGCTGCTGCGTATCGCGGCGCGCGCGCTCAAGACGCCGCTGCAGCGCGGCATCGCCCTTGCC
TCCTTCGTCGCGATCGCGATTTTCACGCTTCCCTTTCCGCTGGTGATCCTCGGCGCGCTGCTGATCGGCGGAGCGGCCGG
GCGCTGGCGGTCGGAATGGCTGAAGCTGTCGCCCACCGTCGCGGCGCCCCCGCCGCCCGCGCCTTCGCCGTGGAAGCAGA
GCCTTTCGGCAATCCTGATCTGGGGCGCGGTCTGGGCCGCACCGATGCTGCTGATCCTCGCAACGCTCGGCCGCGGCCAT
GTGCTGTGGGATATCGGCGCCTTTTTCTCGCAGTTGGCGGTCGTCACCTTCGGCGGCGCCTATGCGGTGCTTGCCTATAT
GGCACAGGAAGCGGTCAGCGGCTTCGGCTGGCTGCAACCGGGCGAGATGGCCGACGGGCTGGGGCTTGCCGAAACGACGC
CGGGGCCGCTGATCCTCGTTACCCAATTTGTCGGCTTTCTCGCCGCTTATCGCGATGCGGCGCCGTTCACGCCCTTTGTC
GCGGCGCTGTTCGGCGCGGGCCTGACGCTGTGGGTGACCTTCGCGCCCTGCTTTCTGTGGATCTTCACCTTCGCACCGTG
GATCGACCGGCTCGAGCGCGCGACGGGATTGAAGGGCGCGCTTGCGGCGGTGACCGCGGCGGTGGTCGGCGTGATCGCCA
ACCTGTCGCTGTGGTTCGCGCTGCATGTGCTGTTCCGTGACCTGATCCGCAGCGGATGGGGCGTGGAACTGCCGGTGCTT
GCCAGCCTCGACCTTCGCGCGCTGGCGCTGGCGCTGCTCGCGGCGCTGCTGCTGTTCCGCTTCAGGATGGGGATTGTGCC
GGTGCTGGCGCTCTGTTCGGCGGCCGGTCTGCTGGTCGGCTTTGTCGTTCCGTCACTGGATTTTACCTGA

Upstream 100 bases:

>100_bases
GGCGCCGCGCTAATCTCGCGGCATCGGGGCAAGGCAACCTCCCGGTCAGGCGTTCGCCCAAGCGTTGCTTTTTCAGCCGG
TTCGTCCCGGATGGAGAAGT

Downstream 100 bases:

>100_bases
CGCTTCGCTACGATTGCCCGATGACGACCGACGACGACAGCCTCCGCCCCGCGACGCGGCTCGTTCAGGGCGGGCGGCGG
CCCGAATGGACCGGCGATCC

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MPMTDIPDVAPSPRHPRFADAIRAYARVGCLSFGGPAGQIALMHREFVDERRWVDEATFLHALNFCNLLPGPEAQQLATW
IGWRLHGLKGGLAAGLLFVLPGAAVMLGLSMLYVLAAGLGWFAALFLGIKAAVLAIVVQALLRIAARALKTPLQRGIALA
SFVAIAIFTLPFPLVILGALLIGGAAGRWRSEWLKLSPTVAAPPPPAPSPWKQSLSAILIWGAVWAAPMLLILATLGRGH
VLWDIGAFFSQLAVVTFGGAYAVLAYMAQEAVSGFGWLQPGEMADGLGLAETTPGPLILVTQFVGFLAAYRDAAPFTPFV
AALFGAGLTLWVTFAPCFLWIFTFAPWIDRLERATGLKGALAAVTAAVVGVIANLSLWFALHVLFRDLIRSGWGVELPVL
ASLDLRALALALLAALLLFRFRMGIVPVLALCSAAGLLVGFVVPSLDFT

Sequences:

>Translated_449_residues
MPMTDIPDVAPSPRHPRFADAIRAYARVGCLSFGGPAGQIALMHREFVDERRWVDEATFLHALNFCNLLPGPEAQQLATW
IGWRLHGLKGGLAAGLLFVLPGAAVMLGLSMLYVLAAGLGWFAALFLGIKAAVLAIVVQALLRIAARALKTPLQRGIALA
SFVAIAIFTLPFPLVILGALLIGGAAGRWRSEWLKLSPTVAAPPPPAPSPWKQSLSAILIWGAVWAAPMLLILATLGRGH
VLWDIGAFFSQLAVVTFGGAYAVLAYMAQEAVSGFGWLQPGEMADGLGLAETTPGPLILVTQFVGFLAAYRDAAPFTPFV
AALFGAGLTLWVTFAPCFLWIFTFAPWIDRLERATGLKGALAAVTAAVVGVIANLSLWFALHVLFRDLIRSGWGVELPVL
ASLDLRALALALLAALLLFRFRMGIVPVLALCSAAGLLVGFVVPSLDFT
>Mature_448_residues
PMTDIPDVAPSPRHPRFADAIRAYARVGCLSFGGPAGQIALMHREFVDERRWVDEATFLHALNFCNLLPGPEAQQLATWI
GWRLHGLKGGLAAGLLFVLPGAAVMLGLSMLYVLAAGLGWFAALFLGIKAAVLAIVVQALLRIAARALKTPLQRGIALAS
FVAIAIFTLPFPLVILGALLIGGAAGRWRSEWLKLSPTVAAPPPPAPSPWKQSLSAILIWGAVWAAPMLLILATLGRGHV
LWDIGAFFSQLAVVTFGGAYAVLAYMAQEAVSGFGWLQPGEMADGLGLAETTPGPLILVTQFVGFLAAYRDAAPFTPFVA
ALFGAGLTLWVTFAPCFLWIFTFAPWIDRLERATGLKGALAAVTAAVVGVIANLSLWFALHVLFRDLIRSGWGVELPVLA
SLDLRALALALLAALLLFRFRMGIVPVLALCSAAGLLVGFVVPSLDFT

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 47687; Mature: 47556

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PMTDIPDVAPSPRHPRFADAIRAYARVGCLSFGGPAGQIALMHREFVDERRWVDEATFL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HALNFCNLLPGPEAQQLATWIGWRLHGLKGGLAAGLLFVLPGAAVMLGLSMLYVLAAGLG
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFAALFLGIKAAVLAIVVQALLRIAARALKTPLQRGIALASFVAIAIFTLPFPLVILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGGAAGRWRSEWLKLSPTVAAPPPPAPSPWKQSLSAILIWGAVWAAPMLLILATLGRGH
HHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VLWDIGAFFSQLAVVTFGGAYAVLAYMAQEAVSGFGWLQPGEMADGLGLAETTPGPLILV
EEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHH
TQFVGFLAAYRDAAPFTPFVAALFGAGLTLWVTFAPCFLWIFTFAPWIDRLERATGLKGA
HHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAAVTAAVVGVIANLSLWFALHVLFRDLIRSGWGVELPVLASLDLRALALALLAALLLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
FRMGIVPVLALCSAAGLLVGFVVPSLDFT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]