| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488504
Identifier: 103488504
GI number: 103488504
Start: 3173340
End: 3174056
Strand: Direct
Name: 103488504
Synonym: Sala_3028
Alternate gene names: NA
Gene position: 3173340-3174056 (Clockwise)
Preceding gene: 103488503
Following gene: 103488505
Centisome position: 94.86
GC content: 70.57
Gene sequence:
>717_bases ATGTCCGCCGCCGCGCCCTTCGACTTTGCGGGCCAGCATTTTCAGATGCTGGCCGAAAACGCCTTGTTCTGGCCGCGCCA CGGCGCGCTGATCGTCGCCGACCTGCACCTCGAAAAGGCGAGCTGGTATGCGGCCCGCGGCCAGCCGCTGCCACCCTATG ACAGCCACGACACGCTCGACCGGCTCGCCGCGCTTGGCGCGCGCACCGGCGCGCGCGCGATCTGGTGCCTCGGCGACAGT TTCCACGACCGCGATGCCGCCGCGCGCATCGTCCCCGCCGTTGCCGACCGGCTCGCCCGACAGGCGCGATCGGCGGCGCT CGTCTGGATCGCGGGCAATCACGACGGGCTCAGCGCGGGCGCGTGGGGCGGCACGGTCGCCGACCAACTGCTGGTCGACG GCATCGTCTTTCGCCACCAGGCCGAACGGGGCGAGAGGCGGCCCGAAATATCGGGGCATTTCCATCCCAAATTGTGCAGC CATATCCGTGGCCGTCGCGTTGCGCGCGCCTGTTTCGTCGGCGACGAGCGGCGGCTGATCCTTCCAGCCTTTGGCAGTTT CGCGGGTGGATTGGCGGCGGATGACCCGGCCATCGCCGCCAATTTCGGCGGCCCCTATCGGGCGATGCTCGTGGCAGGCG GGCGACGGCTCGATTTCCCCTGTCCCGGCCACGCGGCGGGTGACGCTACGGCACGCCCGGCTGCTGCTGCGCCTTAG
Upstream 100 bases:
>100_bases ACGCGCGCACCGCAATGCGGGGCAGCGCTTCGCGGCGAATGGGGGCGCGTTCGGGGGGTAGTCGCTTGCCGTGGCGTGGG GGCATTGCCATAGGAAGCGA
Downstream 100 bases:
>100_bases GTCTTCAGGCTGGTTCCGGCCTGTGGCCAAAAAGCATCACCCCGGCAAAAACGACGCAAATGCTGGCGTTTCGCTGGAAT GGCGGCGCAATTGGGTTATG
Product: metallophosphoesterase
Products: NA
Alternate protein names: ICC-Like Phosphoesterase; ICC-Like Protein Phosphoesterase; Phosphoesterase Protein; ICC-Like Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Specific Protein Phosphatase; ICC-Like Phosphoesterases-Like; Metallo-Phosphoesterase; ICC-Like Phosphoesterases
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSAAAPFDFAGQHFQMLAENALFWPRHGALIVADLHLEKASWYAARGQPLPPYDSHDTLDRLAALGARTGARAIWCLGDS FHDRDAAARIVPAVADRLARQARSAALVWIAGNHDGLSAGAWGGTVADQLLVDGIVFRHQAERGERRPEISGHFHPKLCS HIRGRRVARACFVGDERRLILPAFGSFAGGLAADDPAIAANFGGPYRAMLVAGGRRLDFPCPGHAAGDATARPAAAAP
Sequences:
>Translated_238_residues MSAAAPFDFAGQHFQMLAENALFWPRHGALIVADLHLEKASWYAARGQPLPPYDSHDTLDRLAALGARTGARAIWCLGDS FHDRDAAARIVPAVADRLARQARSAALVWIAGNHDGLSAGAWGGTVADQLLVDGIVFRHQAERGERRPEISGHFHPKLCS HIRGRRVARACFVGDERRLILPAFGSFAGGLAADDPAIAANFGGPYRAMLVAGGRRLDFPCPGHAAGDATARPAAAAP >Mature_237_residues SAAAPFDFAGQHFQMLAENALFWPRHGALIVADLHLEKASWYAARGQPLPPYDSHDTLDRLAALGARTGARAIWCLGDSF HDRDAAARIVPAVADRLARQARSAALVWIAGNHDGLSAGAWGGTVADQLLVDGIVFRHQAERGERRPEISGHFHPKLCSH IRGRRVARACFVGDERRLILPAFGSFAGGLAADDPAIAANFGGPYRAMLVAGGRRLDFPCPGHAAGDATARPAAAAP
Specific function: Unknown
COG id: COG1407
COG function: function code R; Predicted ICC-like phosphoesterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25307; Mature: 25176
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAPFDFAGQHFQMLAENALFWPRHGALIVADLHLEKASWYAARGQPLPPYDSHDTLD CCCCCCCCCCHHHHHHHHHCCEECCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCHHHHH RLAALGARTGARAIWCLGDSFHDRDAAARIVPAVADRLARQARSAALVWIAGNHDGLSAG HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC AWGGTVADQLLVDGIVFRHQAERGERRPEISGHFHPKLCSHIRGRRVARACFVGDERRLI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEE LPAFGSFAGGLAADDPAIAANFGGPYRAMLVAGGRRLDFPCPGHAAGDATARPAAAAP EECCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAAAPFDFAGQHFQMLAENALFWPRHGALIVADLHLEKASWYAARGQPLPPYDSHDTLD CCCCCCCCCHHHHHHHHHCCEECCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCHHHHH RLAALGARTGARAIWCLGDSFHDRDAAARIVPAVADRLARQARSAALVWIAGNHDGLSAG HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC AWGGTVADQLLVDGIVFRHQAERGERRPEISGHFHPKLCSHIRGRRVARACFVGDERRLI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCEEE LPAFGSFAGGLAADDPAIAANFGGPYRAMLVAGGRRLDFPCPGHAAGDATARPAAAAP EECCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA