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The map label for this gene is 103488483

Identifier: 103488483

GI number: 103488483

Start: 3148549

End: 3149013

Strand: Reverse

Name: 103488483

Synonym: Sala_3006

Alternate gene names: NA

Gene position: 3149013-3148549 (Counterclockwise)

Preceding gene: 103488484

Following gene: 103488482

Centisome position: 94.14

GC content: 70.11

Gene sequence:

>465_bases
ATGGATATCGCCGCCAAAATCGCCGAACTCGGCCTCGAACTTCCGAAACCCGCCGCGCCGGTCGCCGCCTATGTGCCCGC
GGTCGAACATGGCGGGATGGTCTATGTCAGCGGCCAGCTGCCGTTCCGCGACGGACAGGTCGTGACCGGCCGCCTCGGCG
ACGACATGGACGTGCCGGGCGGGCAGGACGCGGCGCAGCGCGTCGCGCTGATGCTCGTCGCGCAAATCGGGCAAGCGCTG
GGCGGCGACTGGGCCCGCGTCGAACGCATCGTCAAGCTCGGCGTCTTCGTCAACAGCGCGCCGGGCTTCACCGATCAGGC
CAAGGTTGCCAATGGTGCATCCGAACTGTTCGAAAAATTGTTCGGCGAAGTCGGCCGCCACGCGCGCGCCGCGGTCGGCG
TCGCGGTGCTGCCGCTCGGCGCCGCGGTCGAGGCCGACGCGATCGTCGCGGTGCGCCCGGCCTGA

Upstream 100 bases:

>100_bases
GCGAATCGACGATTGGAAAGCGGCCGAGCGCTGGATAATGGCGCGCCTCGCCGAAAAAATCCCCGCCCCGGCACCGCAGC
CGGTTTAGAAAGGACCCTTC

Downstream 100 bases:

>100_bases
GCGATGGCCGAGGCCGACCCACCGGCGCGGACCATCGCGCTCGGCAGCGGCGTCGCCGCGGTCGACGCGGCGGCGTGGGA
CGGCTTGCACAATGGCGGCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-PSP Superfamily; Transcriptional Regulator; L-PSP Family Endoribonuclease; Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Transcription Regulator; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDIAAKIAELGLELPKPAAPVAAYVPAVEHGGMVYVSGQLPFRDGQVVTGRLGDDMDVPGGQDAAQRVALMLVAQIGQAL
GGDWARVERIVKLGVFVNSAPGFTDQAKVANGASELFEKLFGEVGRHARAAVGVAVLPLGAAVEADAIVAVRPA

Sequences:

>Translated_154_residues
MDIAAKIAELGLELPKPAAPVAAYVPAVEHGGMVYVSGQLPFRDGQVVTGRLGDDMDVPGGQDAAQRVALMLVAQIGQAL
GGDWARVERIVKLGVFVNSAPGFTDQAKVANGASELFEKLFGEVGRHARAAVGVAVLPLGAAVEADAIVAVRPA
>Mature_154_residues
MDIAAKIAELGLELPKPAAPVAAYVPAVEHGGMVYVSGQLPFRDGQVVTGRLGDDMDVPGGQDAAQRVALMLVAQIGQAL
GGDWARVERIVKLGVFVNSAPGFTDQAKVANGASELFEKLFGEVGRHARAAVGVAVLPLGAAVEADAIVAVRPA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15779; Mature: 15779

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAAKIAELGLELPKPAAPVAAYVPAVEHGGMVYVSGQLPFRDGQVVTGRLGDDMDVPG
CCHHHHHHHHCCCCCCCCCCHHHHHCHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCC
GQDAAQRVALMLVAQIGQALGGDWARVERIVKLGVFVNSAPGFTDQAKVANGASELFEKL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCHHHHCCCHHHHHHHH
FGEVGRHARAAVGVAVLPLGAAVEADAIVAVRPA
HHHHCHHHHHHHHHHEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MDIAAKIAELGLELPKPAAPVAAYVPAVEHGGMVYVSGQLPFRDGQVVTGRLGDDMDVPG
CCHHHHHHHHCCCCCCCCCCHHHHHCHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCCC
GQDAAQRVALMLVAQIGQALGGDWARVERIVKLGVFVNSAPGFTDQAKVANGASELFEKL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCHHHHCCCHHHHHHHH
FGEVGRHARAAVGVAVLPLGAAVEADAIVAVRPA
HHHHCHHHHHHHHHHEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA