Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488482

Identifier: 103488482

GI number: 103488482

Start: 3147394

End: 3148545

Strand: Reverse

Name: 103488482

Synonym: Sala_3005

Alternate gene names: NA

Gene position: 3148545-3147394 (Counterclockwise)

Preceding gene: 103488483

Following gene: 103488479

Centisome position: 94.12

GC content: 66.84

Gene sequence:

>1152_bases
ATGGCCGAGGCCGACCCACCGGCGCGGACCATCGCGCTCGGCAGCGGCGTCGCCGCGGTCGACGCGGCGGCGTGGGACGG
CTTGCACAATGGCGGCAATCCGTTCGTCGACCACGCCTTCCTGTCGCTGCTCGAAGAATCGGGCAGCGTCGGACCGGGCA
CCGGGTGGCAGGCCGCGCCGCTGCTTGTCGAGGACGCGACCGGTTCGCTGGTCGCAGCCGCGCCCGCCTATCTCAAATCG
CACAGCCAGGGCGAATATGTGTTCGACCATGGCTGGGCCGACGCCTGGGCGCGCGCGGGCGGCGATTATTATCCGAAGCT
GCAGATCGCGGTGCCCTTCACCCCCGTGCCGGGACCGCGGCTGCTTGCGCGGGACAGCGGCGACGCACGGCTGCTGCTCC
GCGCCGCCGAAGCCGTCGTGCGGCAGAATGGCCTGTCGTCGGCGCACGCGACCTTTGTGGCGCCCGACCAGATGCCCTTG
TTCGAGGAGGCGGGCTGGCTCATCCGCCGCGACATCCAGTTTCACTTCGCGAATCGGGGCTATGCCAGCTTCGACGATTT
CCTCGCCTCGCTCAATTCGCAGAAGCGCAAGCAGTTGCGCAAGGAAAGGTTCCGCGCGGCCCAGGGCCTGCGGATCGAGG
AACTCACCGGCGAGACGATCCGCCCCGAACATTGGGATGCTATGTGGCTTTTCTATCAGGACACCGGCGCGCGCAAATGG
GGGCATCCCTATCTGACGCGCGCGGCCTTCGACCTGATGGGCGCGGCGATGGCGGACAAGATCATCCTGCTGATCGCTTA
TGATGCCGACGAGCGACCGGTCGCCGGGGCACTGCACTTCCTTGGCGCCGATACGCTCTACGGCCGCTATTGGGGGTGCC
TCGCCGACATCCCCTATCTGCATTTCGAACTATGCTATTATCGCGCGATCGACATTGCGATCGAACGCGGGCTGAAACGG
GTCGAGGCGGGCGCGCAGGGCGGGCACAAGCTCGCGCGCGGCTATGGCCCTGTCGCGACCTGGTCGGCGCATTTCATCGC
CGATCCGGGCTTTCGCCGTGCAGTTGCCGATTATCTCGATCGGGAACGCCGTGCCGAAGCGGCGGAAATGGAGTGGCTGG
AGGGGCATATGCCCTTCAGGCGGAAGAGCTGA

Upstream 100 bases:

>100_bases
AGTCGGCCGCCACGCGCGCGCCGCGGTCGGCGTCGCGGTGCTGCCGCTCGGCGCCGCGGTCGAGGCCGACGCGATCGTCG
CGGTGCGCCCGGCCTGAGCG

Downstream 100 bases:

>100_bases
GCCAGTTGCCTGTTCCGTTCGTGTCGAGCGAAGTCGAGATGCGAACGGGAAGAGGCGCGATCCTGTTTACGCCACGAACC
GCCGCGCGGCCGGACGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MAEADPPARTIALGSGVAAVDAAAWDGLHNGGNPFVDHAFLSLLEESGSVGPGTGWQAAPLLVEDATGSLVAAAPAYLKS
HSQGEYVFDHGWADAWARAGGDYYPKLQIAVPFTPVPGPRLLARDSGDARLLLRAAEAVVRQNGLSSAHATFVAPDQMPL
FEEAGWLIRRDIQFHFANRGYASFDDFLASLNSQKRKQLRKERFRAAQGLRIEELTGETIRPEHWDAMWLFYQDTGARKW
GHPYLTRAAFDLMGAAMADKIILLIAYDADERPVAGALHFLGADTLYGRYWGCLADIPYLHFELCYYRAIDIAIERGLKR
VEAGAQGGHKLARGYGPVATWSAHFIADPGFRRAVADYLDRERRAEAAEMEWLEGHMPFRRKS

Sequences:

>Translated_383_residues
MAEADPPARTIALGSGVAAVDAAAWDGLHNGGNPFVDHAFLSLLEESGSVGPGTGWQAAPLLVEDATGSLVAAAPAYLKS
HSQGEYVFDHGWADAWARAGGDYYPKLQIAVPFTPVPGPRLLARDSGDARLLLRAAEAVVRQNGLSSAHATFVAPDQMPL
FEEAGWLIRRDIQFHFANRGYASFDDFLASLNSQKRKQLRKERFRAAQGLRIEELTGETIRPEHWDAMWLFYQDTGARKW
GHPYLTRAAFDLMGAAMADKIILLIAYDADERPVAGALHFLGADTLYGRYWGCLADIPYLHFELCYYRAIDIAIERGLKR
VEAGAQGGHKLARGYGPVATWSAHFIADPGFRRAVADYLDRERRAEAAEMEWLEGHMPFRRKS
>Mature_382_residues
AEADPPARTIALGSGVAAVDAAAWDGLHNGGNPFVDHAFLSLLEESGSVGPGTGWQAAPLLVEDATGSLVAAAPAYLKSH
SQGEYVFDHGWADAWARAGGDYYPKLQIAVPFTPVPGPRLLARDSGDARLLLRAAEAVVRQNGLSSAHATFVAPDQMPLF
EEAGWLIRRDIQFHFANRGYASFDDFLASLNSQKRKQLRKERFRAAQGLRIEELTGETIRPEHWDAMWLFYQDTGARKWG
HPYLTRAAFDLMGAAMADKIILLIAYDADERPVAGALHFLGADTLYGRYWGCLADIPYLHFELCYYRAIDIAIERGLKRV
EAGAQGGHKLARGYGPVATWSAHFIADPGFRRAVADYLDRERRAEAAEMEWLEGHMPFRRKS

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42299; Mature: 42168

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEADPPARTIALGSGVAAVDAAAWDGLHNGGNPFVDHAFLSLLEESGSVGPGTGWQAAP
CCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
LLVEDATGSLVAAAPAYLKSHSQGEYVFDHGWADAWARAGGDYYPKLQIAVPFTPVPGPR
EEEECCCCCEEECCHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCC
LLARDSGDARLLLRAAEAVVRQNGLSSAHATFVAPDQMPLFEEAGWLIRRDIQFHFANRG
EEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCEEEEEEEEEECCCC
YASFDDFLASLNSQKRKQLRKERFRAAQGLRIEELTGETIRPEHWDAMWLFYQDTGARKW
CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCC
GHPYLTRAAFDLMGAAMADKIILLIAYDADERPVAGALHFLGADTLYGRYWGCLADIPYL
CCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHH
HFELCYYRAIDIAIERGLKRVEAGAQGGHKLARGYGPVATWSAHFIADPGFRRAVADYLD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCEECCCCHHHHHHHHHH
RERRAEAAEMEWLEGHMPFRRKS
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEADPPARTIALGSGVAAVDAAAWDGLHNGGNPFVDHAFLSLLEESGSVGPGTGWQAAP
CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
LLVEDATGSLVAAAPAYLKSHSQGEYVFDHGWADAWARAGGDYYPKLQIAVPFTPVPGPR
EEEECCCCCEEECCHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCC
LLARDSGDARLLLRAAEAVVRQNGLSSAHATFVAPDQMPLFEEAGWLIRRDIQFHFANRG
EEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCEEEEEEEEEECCCC
YASFDDFLASLNSQKRKQLRKERFRAAQGLRIEELTGETIRPEHWDAMWLFYQDTGARKW
CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCC
GHPYLTRAAFDLMGAAMADKIILLIAYDADERPVAGALHFLGADTLYGRYWGCLADIPYL
CCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHH
HFELCYYRAIDIAIERGLKRVEAGAQGGHKLARGYGPVATWSAHFIADPGFRRAVADYLD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCEECCCCHHHHHHHHHH
RERRAEAAEMEWLEGHMPFRRKS
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA