| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488479
Identifier: 103488479
GI number: 103488479
Start: 3145125
End: 3146006
Strand: Reverse
Name: 103488479
Synonym: Sala_3002
Alternate gene names: NA
Gene position: 3146006-3145125 (Counterclockwise)
Preceding gene: 103488482
Following gene: 103488478
Centisome position: 94.05
GC content: 65.42
Gene sequence:
>882_bases ATGATATCATTTCGCGCGTCGGTCGCCCATGCCGCGCCAACAGGAAAATCGCAACGCCCCATGACGAACTCCGCGACGAC CCCCGCTCCGCACCGCATCATCTTTGCCAATGAAAAGGGCGGAACGGGCAAATCGACCTGCGCCGTGCATTTCGCGGTTG CGCTGGCAAGCCAGGGCTGGCGCGTCGCGGGGATCGACCTCGACCCCCGCCAGCGCACCTTTCATCGCTATCTCGAGAAT CGCACCAACACCGCACGACGGCGCGACATCGAATTGCCGACGCCGCAGTTCGAGGTGTTCGAGGGATCGACGATCGAGGA GCTCGACACGCAGGTGGCGCGGCTGACCGAAGGCGCCGATTATTTCATCGCCGACACGCCGGGCCGCGACGATGTCTTCG CCCGCCACCTTGCAACCACCGCCGACACGCTCGTCACGCCGATCAACGACAGCTTCATCGATTTCGACCTGATCGGCCAG GTCGATCCCGAGACATTTCAGGTGACGCGCCCCAGCTTTTATTCGGAGCTGATCTGGGACACGCGCAAGGCGCGCGCCAA GAGCGACGGGCGCACGATCGACTGGATCATCCTGCGCAACCGCCTCCAGCATGTCGACGCGCACAATATGCGGCGCGTCG GCGAGGCGCTGGGCCAGTTGTCGCGCCGCGTCGGCTTTCGCGTCATCCCCGGCCTTGGCGAGCGCGTCATCTATCGCGAA CTCTTCCCGGCCGGGCTTACGCTCCTCGACAAGGCGCATCTGGGCGGCATGGGAATCGGCCATGTCGTCGCGCGGCAGGA ATTGCGCGAGGCGATGGGCGGCCTCAACCTGCCCGCGCGCGAGCGACTGCATCCCGACGGCGACCTGTTTGCTGCCGCCT GA
Upstream 100 bases:
>100_bases CGATGCTCTTGCCGCCCTGTTTCAGTGCCGTGACGGCACGGTGGAGCATCGCGATGTCACGGATGATTTGCACGGCCGGG CGCCCTCCGATATTGGCGCG
Downstream 100 bases:
>100_bases CCTGCTTCTCCCCCCAAGAGGATCGACGATGACCCATGATTTCCATCCGACGATGCTGCGCGAATATGACATTCGCGGCG TCGTTGGCGATACGTTGTCC
Product: chromosome partitioning ATPase protein-like protein
Products: NA
Alternate protein names: Chromosome Partitioning Protein; ATPases Involved In Chromosome Partitioning-Like Protein; ATPase; Chromosome Partitioning Protein ParA; Chromosome Partitioning Protein-Like Protein; Chromosome Partitioning ATPase Protein-Like; ATPase MipZ Superfamily; Chromosome Partitioning Protein MipZ; Division Plane Positioning ATPase MipZ; Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning; ATPases Involved In Chromosome Partitioning-Like; Partition-Related Protein; ATPase Mipz; ParA-Like Protein
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MISFRASVAHAAPTGKSQRPMTNSATTPAPHRIIFANEKGGTGKSTCAVHFAVALASQGWRVAGIDLDPRQRTFHRYLEN RTNTARRRDIELPTPQFEVFEGSTIEELDTQVARLTEGADYFIADTPGRDDVFARHLATTADTLVTPINDSFIDFDLIGQ VDPETFQVTRPSFYSELIWDTRKARAKSDGRTIDWIILRNRLQHVDAHNMRRVGEALGQLSRRVGFRVIPGLGERVIYRE LFPAGLTLLDKAHLGGMGIGHVVARQELREAMGGLNLPARERLHPDGDLFAAA
Sequences:
>Translated_293_residues MISFRASVAHAAPTGKSQRPMTNSATTPAPHRIIFANEKGGTGKSTCAVHFAVALASQGWRVAGIDLDPRQRTFHRYLEN RTNTARRRDIELPTPQFEVFEGSTIEELDTQVARLTEGADYFIADTPGRDDVFARHLATTADTLVTPINDSFIDFDLIGQ VDPETFQVTRPSFYSELIWDTRKARAKSDGRTIDWIILRNRLQHVDAHNMRRVGEALGQLSRRVGFRVIPGLGERVIYRE LFPAGLTLLDKAHLGGMGIGHVVARQELREAMGGLNLPARERLHPDGDLFAAA >Mature_293_residues MISFRASVAHAAPTGKSQRPMTNSATTPAPHRIIFANEKGGTGKSTCAVHFAVALASQGWRVAGIDLDPRQRTFHRYLEN RTNTARRRDIELPTPQFEVFEGSTIEELDTQVARLTEGADYFIADTPGRDDVFARHLATTADTLVTPINDSFIDFDLIGQ VDPETFQVTRPSFYSELIWDTRKARAKSDGRTIDWIILRNRLQHVDAHNMRRVGEALGQLSRRVGFRVIPGLGERVIYRE LFPAGLTLLDKAHLGGMGIGHVVARQELREAMGGLNLPARERLHPDGDLFAAA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32578; Mature: 32578
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFRASVAHAAPTGKSQRPMTNSATTPAPHRIIFANEKGGTGKSTCAVHFAVALASQGW CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC RVAGIDLDPRQRTFHRYLENRTNTARRRDIELPTPQFEVFEGSTIEELDTQVARLTEGAD EEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC YFIADTPGRDDVFARHLATTADTLVTPINDSFIDFDLIGQVDPETFQVTRPSFYSELIWD EEEECCCCCHHHHHHHHHHHHHHHEECCCCCEECEEEECCCCCCEEEEECCHHHHHHHHH TRKARAKSDGRTIDWIILRNRLQHVDAHNMRRVGEALGQLSRRVGFRVIPGLGERVIYRE HHHHHHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH LFPAGLTLLDKAHLGGMGIGHVVARQELREAMGGLNLPARERLHPDGDLFAAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECC >Mature Secondary Structure MISFRASVAHAAPTGKSQRPMTNSATTPAPHRIIFANEKGGTGKSTCAVHFAVALASQGW CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC RVAGIDLDPRQRTFHRYLENRTNTARRRDIELPTPQFEVFEGSTIEELDTQVARLTEGAD EEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC YFIADTPGRDDVFARHLATTADTLVTPINDSFIDFDLIGQVDPETFQVTRPSFYSELIWD EEEECCCCCHHHHHHHHHHHHHHHEECCCCCEECEEEECCCCCCEEEEECCHHHHHHHHH TRKARAKSDGRTIDWIILRNRLQHVDAHNMRRVGEALGQLSRRVGFRVIPGLGERVIYRE HHHHHHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH LFPAGLTLLDKAHLGGMGIGHVVARQELREAMGGLNLPARERLHPDGDLFAAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA