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The map label for this gene is ssb [H]

Identifier: 103488465

GI number: 103488465

Start: 3130758

End: 3131279

Strand: Direct

Name: ssb [H]

Synonym: Sala_2988

Alternate gene names: 103488465

Gene position: 3130758-3131279 (Clockwise)

Preceding gene: 103488464

Following gene: 103488466

Centisome position: 93.59

GC content: 65.71

Gene sequence:

>522_bases
ATGGCTGGCAGCGTCAACAAGGTAATTCTCATCGGCAACCTCGGCGCCGATCCCGAAATCAAGTCGTTCCAGAATGGCGG
CAAGATCGCCAACATCCGCATCGCGACATCCGAACAGTGGAAGGACCGGATGACCGGCGAGCGCAAGGAGCGCACCGAAT
GGCATAATGTCGTGATCAACGGCGAAGGGCTGGTCGGCGTCGTCGAACGCTATCTCAAGAAGGGCAGCAAGGTTTATGTC
GAGGGCAGCCTGCGCACCCGCAAGTGGCAGGACCGCGACGGCAACGACCGTTATACGACCGAAGTGGTGATTGCCGGCAT
GGGCGGCAATCTGACGATGCTCGACGGCGCGCCCGGTGGCGGCGCGCGCGGTGGCGGCGGCGATAGCTGGAATCAGGGCG
GCGGTTCGAGCGGCGGCTGGGATCAGGGGGGCAGCGGCGGCGGCGGTTCGGGCGGCGGCGGCGCGCCGGGTGGCGGACGC
CCGCCGTTCGACGATGATCTGGACGATGACGTCCCATTCTGA

Upstream 100 bases:

>100_bases
GTTTGCGCTCGCCTATGCCGCTGCTGGTATCACATACTGGACAGCCGTTGCCTTTGGCCTAGGCTGATCCTCCCAACTTA
TGAGCGGAGCGGAGCGGCGG

Downstream 100 bases:

>100_bases
CGATGAGGCCGCATGGCGCGTGACCCGCTGACCGCCGCGGACGTCGCGCGCGGCGTGTGTCGGCTGTTCGCACAACAGGG
GCTGGTCGCGATCCCCGAAG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MAGSVNKVILIGNLGADPEIKSFQNGGKIANIRIATSEQWKDRMTGERKERTEWHNVVINGEGLVGVVERYLKKGSKVYV
EGSLRTRKWQDRDGNDRYTTEVVIAGMGGNLTMLDGAPGGGARGGGGDSWNQGGGSSGGWDQGGSGGGGSGGGGAPGGGR
PPFDDDLDDDVPF

Sequences:

>Translated_173_residues
MAGSVNKVILIGNLGADPEIKSFQNGGKIANIRIATSEQWKDRMTGERKERTEWHNVVINGEGLVGVVERYLKKGSKVYV
EGSLRTRKWQDRDGNDRYTTEVVIAGMGGNLTMLDGAPGGGARGGGGDSWNQGGGSSGGWDQGGSGGGGSGGGGAPGGGR
PPFDDDLDDDVPF
>Mature_172_residues
AGSVNKVILIGNLGADPEIKSFQNGGKIANIRIATSEQWKDRMTGERKERTEWHNVVINGEGLVGVVERYLKKGSKVYVE
GSLRTRKWQDRDGNDRYTTEVVIAGMGGNLTMLDGAPGGGARGGGGDSWNQGGGSSGGWDQGGSGGGGSGGGGAPGGGRP
PFDDDLDDDVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=177, Percent_Identity=52.5423728813559, Blast_Score=154, Evalue=4e-39,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17924; Mature: 17793

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILIGNLGADPEIKSFQNGGKIANIRIATSEQWKDRMTGERKERTEWHNVVIN
CCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCHHHHHHHCCCHHHCCCCCEEEEC
GEGLVGVVERYLKKGSKVYVEGSLRTRKWQDRDGNDRYTTEVVIAGMGGNLTMLDGAPGG
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCC
GARGGGGDSWNQGGGSSGGWDQGGSGGGGSGGGGAPGGGRPPFDDDLDDDVPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSVNKVILIGNLGADPEIKSFQNGGKIANIRIATSEQWKDRMTGERKERTEWHNVVIN
CCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCHHHHHHHCCCHHHCCCCCEEEEC
GEGLVGVVERYLKKGSKVYVEGSLRTRKWQDRDGNDRYTTEVVIAGMGGNLTMLDGAPGG
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCC
GARGGGGDSWNQGGGSSGGWDQGGSGGGGSGGGGAPGGGRPPFDDDLDDDVPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 10503543 [H]