Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488438

Identifier: 103488438

GI number: 103488438

Start: 3103736

End: 3104788

Strand: Reverse

Name: 103488438

Synonym: Sala_2961

Alternate gene names: NA

Gene position: 3104788-3103736 (Counterclockwise)

Preceding gene: 103488439

Following gene: 103488434

Centisome position: 92.81

GC content: 69.61

Gene sequence:

>1053_bases
ATGAGCGCCCGCAAAACCGCGATCGTCGTCGCGCCCGGCCGCGGCACTTATGGCAAGGGCGAGCTGGGCAGCATCGCGCG
GCTGCATGGCGCGCGATTTGCCGATCTGATCGCCGATTTCGACGCGCAGCGCCGGATGCGCGGGCAGCCGACGGTGAGCG
AACTCGACGGCGCCGATCGCTTCAGCGTGGCAACGCACATGCGCGGCGACGTCGCGGCGCCGCTGATCTACACCGCTACC
GCGCTCGATTACCTGAGCATCGACCGCGACAGGTTCGACATCGTTGCGGCGCTCGGCAATTCGATGGGCTGGTACAGCGC
GCTCGCGCTGGGCGGCGCGGTGTCGATCAGCGACGGGTTCCGCATCGCCAACGCCATGGGGCTCAACAGCCAGACGCACG
GCCCCGGCGGGCAGGTCCTGCTGCAAATCGTCGATGACGACTGGCGCCCGATCCCCGACCGACGCGACCGGCTGTTCGAT
CTTGTCGCCGCGATCGACGCGCGGCCGGGCCATGACCTCGCGCTGTCGATCGACCTCGCCGGGATGCTGGTGTTCGCGGG
CAATGAGGAGGGCCTCGCCGCGCTGCTCGCCGAAGCGCCGCCGACGCCGGGGCGCGATCCGCTGCGCCTCGCGGGGCACG
GCCCCTTTCATACCCCGCTGATGATCGGCAGTTCGGACAAGGCGAGGGCCGAACTGCCGCCGACGCTGTTCGGCGCCCCG
GCGATCCCGCTGGTCGATGGTCGCGGCCATATCTGGCGCCGCTTCTCGTCCGATCCCGCGGCAGTCTGGGAATACAGCTT
CGGTCACCAGATCCTGGCCCCCTATGATTTCGCGCTTTCGGTGCAGGTCGCGGTCAAGGAGGTCGCGCCCGATGTCATCA
TCCTGCCCGGCCCCGGCGACACGCTGGGCGGCGCGATCGCCCAGGCGCTGATCGGCATCGGCTGGCAGGGGCTGACCAGC
AAGGCCGATTTCATGGCGCGGCAGGCGTCGGACCCGATCCTCCTGTCGATGGGCCGCGCCGAGCAGCGCACGCTGGTCAT
CAGGGACAAATAG

Upstream 100 bases:

>100_bases
GCATCGCCGCCGACGACAGCTTCATCCCGCTGGGCAGGGCGGCAACGCTGACCCTGCCGAGCCGCGAGGGCATCATTGCC
GCGGCAAGGGAGCTCCTGGC

Downstream 100 bases:

>100_bases
GGTCGACAGGGCGTTTTCCCTGCCGACCCGTCGTGCGGGCGCGGTCAGGTGGGGTTGACCGCGCCCGGATGAACGGCAGC
GCCCATGGGGACCAACACAA

Product: putative acyl-carrier protein

Products: NA

Alternate protein names: Acyl-Carrier Domain Protein; Malonyl CoA-Acyl Carrier Protein Transacylase; Acyl-Carrier Domain-Containing Protein; (Acyl-Carrier-Protein) S-Malonyltransferase-Like Protein; Acyl-Carrier Protein; Malonyl-CoA-[Acyl-Carrier-Protein] Transacylase

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSARKTAIVVAPGRGTYGKGELGSIARLHGARFADLIADFDAQRRMRGQPTVSELDGADRFSVATHMRGDVAAPLIYTAT
ALDYLSIDRDRFDIVAALGNSMGWYSALALGGAVSISDGFRIANAMGLNSQTHGPGGQVLLQIVDDDWRPIPDRRDRLFD
LVAAIDARPGHDLALSIDLAGMLVFAGNEEGLAALLAEAPPTPGRDPLRLAGHGPFHTPLMIGSSDKARAELPPTLFGAP
AIPLVDGRGHIWRRFSSDPAAVWEYSFGHQILAPYDFALSVQVAVKEVAPDVIILPGPGDTLGGAIAQALIGIGWQGLTS
KADFMARQASDPILLSMGRAEQRTLVIRDK

Sequences:

>Translated_350_residues
MSARKTAIVVAPGRGTYGKGELGSIARLHGARFADLIADFDAQRRMRGQPTVSELDGADRFSVATHMRGDVAAPLIYTAT
ALDYLSIDRDRFDIVAALGNSMGWYSALALGGAVSISDGFRIANAMGLNSQTHGPGGQVLLQIVDDDWRPIPDRRDRLFD
LVAAIDARPGHDLALSIDLAGMLVFAGNEEGLAALLAEAPPTPGRDPLRLAGHGPFHTPLMIGSSDKARAELPPTLFGAP
AIPLVDGRGHIWRRFSSDPAAVWEYSFGHQILAPYDFALSVQVAVKEVAPDVIILPGPGDTLGGAIAQALIGIGWQGLTS
KADFMARQASDPILLSMGRAEQRTLVIRDK
>Mature_349_residues
SARKTAIVVAPGRGTYGKGELGSIARLHGARFADLIADFDAQRRMRGQPTVSELDGADRFSVATHMRGDVAAPLIYTATA
LDYLSIDRDRFDIVAALGNSMGWYSALALGGAVSISDGFRIANAMGLNSQTHGPGGQVLLQIVDDDWRPIPDRRDRLFDL
VAAIDARPGHDLALSIDLAGMLVFAGNEEGLAALLAEAPPTPGRDPLRLAGHGPFHTPLMIGSSDKARAELPPTLFGAPA
IPLVDGRGHIWRRFSSDPAAVWEYSFGHQILAPYDFALSVQVAVKEVAPDVIILPGPGDTLGGAIAQALIGIGWQGLTSK
ADFMARQASDPILLSMGRAEQRTLVIRDK

Specific function: Unknown

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37200; Mature: 37069

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARKTAIVVAPGRGTYGKGELGSIARLHGARFADLIADFDAQRRMRGQPTVSELDGADR
CCCCCEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHCCCHHHHHCCCCCHHHCCCCCC
FSVATHMRGDVAAPLIYTATALDYLSIDRDRFDIVAALGNSMGWYSALALGGAVSISDGF
EEHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCEEEECCCC
RIANAMGLNSQTHGPGGQVLLQIVDDDWRPIPDRRDRLFDLVAAIDARPGHDLALSIDLA
EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEE
GMLVFAGNEEGLAALLAEAPPTPGRDPLRLAGHGPFHTPLMIGSSDKARAELPPTLFGAP
EEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCC
AIPLVDGRGHIWRRFSSDPAAVWEYSFGHQILAPYDFALSVQVAVKEVAPDVIILPGPGD
CCEEECCCCCEEEECCCCCCEEEEECCCCEEECCCCEEEEEEEEHHHHCCCEEEECCCCC
TLGGAIAQALIGIGWQGLTSKADFMARQASDPILLSMGRAEQRTLVIRDK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECC
>Mature Secondary Structure 
SARKTAIVVAPGRGTYGKGELGSIARLHGARFADLIADFDAQRRMRGQPTVSELDGADR
CCCCEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHCCCHHHHHCCCCCHHHCCCCCC
FSVATHMRGDVAAPLIYTATALDYLSIDRDRFDIVAALGNSMGWYSALALGGAVSISDGF
EEHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCEEEECCCC
RIANAMGLNSQTHGPGGQVLLQIVDDDWRPIPDRRDRLFDLVAAIDARPGHDLALSIDLA
EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEE
GMLVFAGNEEGLAALLAEAPPTPGRDPLRLAGHGPFHTPLMIGSSDKARAELPPTLFGAP
EEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCC
AIPLVDGRGHIWRRFSSDPAAVWEYSFGHQILAPYDFALSVQVAVKEVAPDVIILPGPGD
CCEEECCCCCEEEECCCCCCEEEEECCCCEEECCCCEEEEEEEEHHHHCCCEEEECCCCC
TLGGAIAQALIGIGWQGLTSKADFMARQASDPILLSMGRAEQRTLVIRDK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA