Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488383

Identifier: 103488383

GI number: 103488383

Start: 3056506

End: 3056805

Strand: Reverse

Name: 103488383

Synonym: Sala_2906

Alternate gene names: NA

Gene position: 3056805-3056506 (Counterclockwise)

Preceding gene: 103488384

Following gene: 103488382

Centisome position: 91.38

GC content: 73.0

Gene sequence:

>300_bases
ATGTCGGGTGACAGCAAGATCGGATCCGTTGGCGGCGTCGCCCGCACCGGCCCGCTGCGCCGCGTCGTCGGCGAGGCGAC
GGCTTCGGCCCGCGCACCCGCGCAGGTCCGGCCCGCGTCGGACAATCTGCCCACCGCGCGGTTGACGCGCCTGGCGAACA
ATCTCGCCGACCAGCCGCCGCCGGTCGATGTTGCGCGCGTCGCCGCGCTGCGCACCGCGATCGGCACGGGCAATTACGGC
GTTCACCCGGCGATCATCGCCAGCGCGATGCTCGACTTCCACGGCCGCGGAACCGACTGA

Upstream 100 bases:

>100_bases
CTTTTTGCACGCGGCCGCGCTTAATCCCCCGGATCGCGCGCCGTTAAAGCCTTCGTGAAGCGCGTCGTCACTTTTCTGAC
GGCGCCCGATGGAGGCATGC

Downstream 100 bases:

>100_bases
TGCTGGCGGCGATGGACGAGGTGCAGGCGCGGCTCGATGCGCTGATCGACGCGCTCGACGGGCATGATGCGGGCGCGATC
ATCGCCGCGACCGAAGCGCT

Product: putative anti-sigma-28 factor, FlgM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSGDSKIGSVGGVARTGPLRRVVGEATASARAPAQVRPASDNLPTARLTRLANNLADQPPPVDVARVAALRTAIGTGNYG
VHPAIIASAMLDFHGRGTD

Sequences:

>Translated_99_residues
MSGDSKIGSVGGVARTGPLRRVVGEATASARAPAQVRPASDNLPTARLTRLANNLADQPPPVDVARVAALRTAIGTGNYG
VHPAIIASAMLDFHGRGTD
>Mature_98_residues
SGDSKIGSVGGVARTGPLRRVVGEATASARAPAQVRPASDNLPTARLTRLANNLADQPPPVDVARVAALRTAIGTGNYGV
HPAIIASAMLDFHGRGTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10068; Mature: 9936

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDSKIGSVGGVARTGPLRRVVGEATASARAPAQVRPASDNLPTARLTRLANNLADQPP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PVDVARVAALRTAIGTGNYGVHPAIIASAMLDFHGRGTD
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGDSKIGSVGGVARTGPLRRVVGEATASARAPAQVRPASDNLPTARLTRLANNLADQPP
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PVDVARVAALRTAIGTGNYGVHPAIIASAMLDFHGRGTD
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA