Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488382

Identifier: 103488382

GI number: 103488382

Start: 3056201

End: 3056506

Strand: Reverse

Name: 103488382

Synonym: Sala_2905

Alternate gene names: NA

Gene position: 3056506-3056201 (Counterclockwise)

Preceding gene: 103488383

Following gene: 103488381

Centisome position: 91.37

GC content: 67.65

Gene sequence:

>306_bases
ATGCTGGCGGCGATGGACGAGGTGCAGGCGCGGCTCGATGCGCTGATCGACGCGCTCGACGGGCATGATGCGGGCGCGAT
CATCGCCGCGACCGAAGCGCTGGCAACCGCGGTCATCCTGCTGCGCGGTGCGCCGGTCCCGGCGGGAAGCGAACAGCGCG
CGCGCGCGCTGATCACCCGGACGCTCGGCCAGCTCGAAGCCGCCGCGATGCGCGTCAACATATTGAAGGACTGGACCCGT
CAGCGGATTGACAGAAACCATGACATCCGCGGCACCCGGCCGAGCGGAATTGCTTTAAGCTACTGA

Upstream 100 bases:

>100_bases
TCGCCGCGCTGCGCACCGCGATCGGCACGGGCAATTACGGCGTTCACCCGGCGATCATCGCCAGCGCGATGCTCGACTTC
CACGGCCGCGGAACCGACTG

Downstream 100 bases:

>100_bases
TATTCAGTACTTTACCTGCCACATTACGGAAAGTGGCACGATGATTGCTTTGGGTCTGCTGAACCAGCGGAACCATGATG
ATGAACGCAATCAACCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MLAAMDEVQARLDALIDALDGHDAGAIIAATEALATAVILLRGAPVPAGSEQRARALITRTLGQLEAAAMRVNILKDWTR
QRIDRNHDIRGTRPSGIALSY

Sequences:

>Translated_101_residues
MLAAMDEVQARLDALIDALDGHDAGAIIAATEALATAVILLRGAPVPAGSEQRARALITRTLGQLEAAAMRVNILKDWTR
QRIDRNHDIRGTRPSGIALSY
>Mature_101_residues
MLAAMDEVQARLDALIDALDGHDAGAIIAATEALATAVILLRGAPVPAGSEQRARALITRTLGQLEAAAMRVNILKDWTR
QRIDRNHDIRGTRPSGIALSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10813; Mature: 10813

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAMDEVQARLDALIDALDGHDAGAIIAATEALATAVILLRGAPVPAGSEQRARALITR
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLGQLEAAAMRVNILKDWTRQRIDRNHDIRGTRPSGIALSY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MLAAMDEVQARLDALIDALDGHDAGAIIAATEALATAVILLRGAPVPAGSEQRARALITR
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLGQLEAAAMRVNILKDWTRQRIDRNHDIRGTRPSGIALSY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA