| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is narP [C]
Identifier: 103488375
GI number: 103488375
Start: 3050502
End: 3051002
Strand: Direct
Name: narP [C]
Synonym: Sala_2898
Alternate gene names: 103488375
Gene position: 3050502-3051002 (Clockwise)
Preceding gene: 103488374
Following gene: 103488376
Centisome position: 91.19
GC content: 52.69
Gene sequence:
>501_bases GTGATGCTCTATTCCAACCCCGTGCAAGGCGATCCAGACAATTACATAAGCCTGCTTTCGGCCGCGCAAATCGAAACGTT GCGGCACGTTTACGAGCATAAAAATTCCAAACAGATCGCGCGGATCATGAATGTTTCGCCGCACACCGTGGACGAGCGGG TACGACGGGTTCTAAAAAAGCTTAATGTTTCCAACAGAATAGAAGCTGCCCGGATATTGGCTGTTAACGGTGTCTTCGAT CATGTTACCCCTTATCAGCCTTTGACATATCAATTGATCGACCTAGGCGACGATGCGCCCCCCGCCGATGCCGAAAGGGG GCGCAGTGCGTTTCGGCGGCTATTCGATATCGGTTCGCCTTTTCCTACCGCGTCCCAGCCGGCCAACCGGCATGGGTTGA TGGAAAGGATTATCTGGCCGATTCTCATCGCATTTGCGACGATCTTGGCTTTTTCCGCCCTCTATTCGATCCTTGTCGGA CTTGGTCGTGTTCTGACCTGA
Upstream 100 bases:
>100_bases CCCCCCTGTTACGGTGACTCGTTGTCTGCGAGCGGCAATGTCACCGTAACATGGCTGGACGGCAGATGAATTTGACCCCT GCCGACCTTGATTTCGACTC
Downstream 100 bases:
>100_bases ATGTTCGAACCGAATGCTGCGGGGGGGAAACCGGTAGCATTCTTTTTCAAGGAAAAAGTTAATGCTGAACGAACGAGTGT CTGCAGCCAAGAAGATCGCG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKKLNVSNRIEAARILAVNGVFD HVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSPFPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVG LGRVLT
Sequences:
>Translated_166_residues MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKKLNVSNRIEAARILAVNGVFD HVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSPFPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVG LGRVLT >Mature_166_residues MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKKLNVSNRIEAARILAVNGVFD HVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSPFPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVG LGRVLT
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18607; Mature: 18607
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH LNVSNRIEAARILAVNGVFDHVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSP CCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC FPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVGLGRVLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH LNVSNRIEAARILAVNGVFDHVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSP CCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC FPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVGLGRVLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA