Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488271

Identifier: 103488271

GI number: 103488271

Start: 2959298

End: 2959828

Strand: Direct

Name: 103488271

Synonym: Sala_2794

Alternate gene names: NA

Gene position: 2959298-2959828 (Clockwise)

Preceding gene: 103488269

Following gene: 103488272

Centisome position: 88.46

GC content: 70.06

Gene sequence:

>531_bases
ATGTTTTCCTTACGCAAATGGTTCCGATCCGATCCCGACCCGCGTGAGGCGCGCCGCCCGCTGTGGAATGCGGTGGTCGC
CACCGCGCGCGCGCCGCACTGGTATGTCGAAGGCGGCGTTCCCGACACACTCGACGGCCGGTTCGACATGGTGAGCCTGG
TGACGGCGCTGGTGCTGCACCGCATCGACGACGACCCCGAACAGGCGCTTGCCGGTGTCCAGCTCACCGAATTGTTCGTG
AGCGACATGGACGGGCAGATGCGCCAGATCGGCTTTGGCGACATGGTCGTCGGCAAGCAGGTCGGGCGGATGATGGGGGC
GCTCGGCGGACGTCTCGGCGCCTATCGCGCGCCCGACGGATCGGACGCGCTGCGCGCGGCGCTGATCCGCAACCTGTGGC
GCGGCAAGGCGCCGGACGACGCGGCGCTGACGCATGTGATGGCCGCGGTAGCGGCGCTGCGCGGCGCGCTTGCCGCGATG
CCGGTCGCCGAACTGGTCGCCACCGACCGCCTGCCCGGAGCGCAAGGTTGA

Upstream 100 bases:

>100_bases
AAGCGGCGATCGCGCACAAGCCGCTTGTGCCGCGGCAAAGCTTGCCACAAGCTGACCGGCGCCCCTTTTCGCGCAGCGCG
AATGCACCTAAGCAGCGGCG

Downstream 100 bases:

>100_bases
GCGCCGCACCCGAGTTTTCGCTGGTCGTCACGCTCGCCGACGCAGCGCATGGCCGCGACATCGCGGTCGAGGCCGACGCT
GGCGCGCGCGCGCGGATCGC

Product: CBP3 protein

Products: NA

Alternate protein names: CBP3 Protein; CBP3 Protein Mitochondrial

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MFSLRKWFRSDPDPREARRPLWNAVVATARAPHWYVEGGVPDTLDGRFDMVSLVTALVLHRIDDDPEQALAGVQLTELFV
SDMDGQMRQIGFGDMVVGKQVGRMMGALGGRLGAYRAPDGSDALRAALIRNLWRGKAPDDAALTHVMAAVAALRGALAAM
PVAELVATDRLPGAQG

Sequences:

>Translated_176_residues
MFSLRKWFRSDPDPREARRPLWNAVVATARAPHWYVEGGVPDTLDGRFDMVSLVTALVLHRIDDDPEQALAGVQLTELFV
SDMDGQMRQIGFGDMVVGKQVGRMMGALGGRLGAYRAPDGSDALRAALIRNLWRGKAPDDAALTHVMAAVAALRGALAAM
PVAELVATDRLPGAQG
>Mature_176_residues
MFSLRKWFRSDPDPREARRPLWNAVVATARAPHWYVEGGVPDTLDGRFDMVSLVTALVLHRIDDDPEQALAGVQLTELFV
SDMDGQMRQIGFGDMVVGKQVGRMMGALGGRLGAYRAPDGSDALRAALIRNLWRGKAPDDAALTHVMAAVAALRGALAAM
PVAELVATDRLPGAQG

Specific function: Unknown

COG id: COG5452

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18976; Mature: 18976

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLRKWFRSDPDPREARRPLWNAVVATARAPHWYVEGGVPDTLDGRFDMVSLVTALVLH
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
RIDDDPEQALAGVQLTELFVSDMDGQMRQIGFGDMVVGKQVGRMMGALGGRLGAYRAPDG
HCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDALRAALIRNLWRGKAPDDAALTHVMAAVAALRGALAAMPVAELVATDRLPGAQG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFSLRKWFRSDPDPREARRPLWNAVVATARAPHWYVEGGVPDTLDGRFDMVSLVTALVLH
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
RIDDDPEQALAGVQLTELFVSDMDGQMRQIGFGDMVVGKQVGRMMGALGGRLGAYRAPDG
HCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDALRAALIRNLWRGKAPDDAALTHVMAAVAALRGALAAMPVAELVATDRLPGAQG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA