| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488267
Identifier: 103488267
GI number: 103488267
Start: 2952246
End: 2953181
Strand: Direct
Name: 103488267
Synonym: Sala_2790
Alternate gene names: NA
Gene position: 2952246-2953181 (Clockwise)
Preceding gene: 103488266
Following gene: 103488269
Centisome position: 88.25
GC content: 68.06
Gene sequence:
>936_bases ATGATCGTCGACATCGCGCCGCTCGGCGAAGGCGACCTGGCCACCGCCGACCGGATCTTCCGCCTTGCCTTCGGCACCTT TCTCGGCCTTCCCGATCCGGTACAGTTCATGGGCGACGCCACGCTCGTCGCGCCGCGCTGGCGGGCAGCGCCCGAGGCGA GCTTCGGCGCCTATATCGATGGCGAACTCGTCGGTTCGAACCTCGCGGCGCGCTGGGGCCGCTTCGGCTTCTTCGGTCCG CTGACCATCCATCCCGACCATTGGGGCAGAGGCATCGCCAGCCGGCTGGTCGCGGCGACAATGGAGGCATTCGACCGCTG GGGCATTGCTCAGCGCGGACTGTTTACCTTTCCCGACAGTGCCAAGCATATCAGCCTTTATGGCAAGTTCGGTTTTGTCC GCCAGGCCCCGACCCGGGTGATGGTGCGTGGAACGGGCGCGACAAAGGGCACCGCCGCACGGGCGTCGGCGATGGATGCC GATGCGTTCGCGAGCGCGATGCTGGCGGCGCAGGCGCTCACCGCCGCGATCGAGCCGGGTCTGGACCTCTCGAGCGAGAT CGCCGCCGTGGCGGTGCAGCGCCTCGGCGATACGCTGTTCCTCCATGACGACGGGGGGCTGGCGGGCTTTGCCGTCTGCC ATGTCGGCGCGGGCAGCGAGGCAGGCAGCGACGCCGCCTATGTCAAGTTTGGCGCGGTCCGCCCCGGCGCCGGCGCATCC GGTCGTTTTGCCCGCCTGATCGACACCTGCGACGCCTTTGCCGCATCCGCGGGCGCAGCACGGCTGATTGCAGGGGTCAA CGCCGCGCGCAACGAAGCGCTGCGGATGATGGTCGACGCAGGTTTTGCTCCGATGATCGAAGGTGTCGCGATGCAGCAGC CCGACCGACCGGGGTTCAATCGCCCCGATTGTTTCGTGATCGACGACTGGCGCTAG
Upstream 100 bases:
>100_bases ATGTGCTGCAACTAGGCGATGCCGAAGCGCGCGCGGTCAAGGCGTGGGCGATCGGCGCGCTCGTCGAGGTGGCCATGAAA CAGTCCCGGAGCAAGAGCAA
Downstream 100 bases:
>100_bases GAGCGCGCAATGTCCTTGAGGCGATAGAGCACATCGAGCGCGTCGCGCGGGGTGAGCGCGTCGGGGTCGATGGCGGCGAG CGCGTCGCGGAGTGCGTCCC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MIVDIAPLGEGDLATADRIFRLAFGTFLGLPDPVQFMGDATLVAPRWRAAPEASFGAYIDGELVGSNLAARWGRFGFFGP LTIHPDHWGRGIASRLVAATMEAFDRWGIAQRGLFTFPDSAKHISLYGKFGFVRQAPTRVMVRGTGATKGTAARASAMDA DAFASAMLAAQALTAAIEPGLDLSSEIAAVAVQRLGDTLFLHDDGGLAGFAVCHVGAGSEAGSDAAYVKFGAVRPGAGAS GRFARLIDTCDAFAASAGAARLIAGVNAARNEALRMMVDAGFAPMIEGVAMQQPDRPGFNRPDCFVIDDWR
Sequences:
>Translated_311_residues MIVDIAPLGEGDLATADRIFRLAFGTFLGLPDPVQFMGDATLVAPRWRAAPEASFGAYIDGELVGSNLAARWGRFGFFGP LTIHPDHWGRGIASRLVAATMEAFDRWGIAQRGLFTFPDSAKHISLYGKFGFVRQAPTRVMVRGTGATKGTAARASAMDA DAFASAMLAAQALTAAIEPGLDLSSEIAAVAVQRLGDTLFLHDDGGLAGFAVCHVGAGSEAGSDAAYVKFGAVRPGAGAS GRFARLIDTCDAFAASAGAARLIAGVNAARNEALRMMVDAGFAPMIEGVAMQQPDRPGFNRPDCFVIDDWR >Mature_311_residues MIVDIAPLGEGDLATADRIFRLAFGTFLGLPDPVQFMGDATLVAPRWRAAPEASFGAYIDGELVGSNLAARWGRFGFFGP LTIHPDHWGRGIASRLVAATMEAFDRWGIAQRGLFTFPDSAKHISLYGKFGFVRQAPTRVMVRGTGATKGTAARASAMDA DAFASAMLAAQALTAAIEPGLDLSSEIAAVAVQRLGDTLFLHDDGGLAGFAVCHVGAGSEAGSDAAYVKFGAVRPGAGAS GRFARLIDTCDAFAASAGAARLIAGVNAARNEALRMMVDAGFAPMIEGVAMQQPDRPGFNRPDCFVIDDWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32586; Mature: 32586
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDIAPLGEGDLATADRIFRLAFGTFLGLPDPVQFMGDATLVAPRWRAAPEASFGAYID CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCCCCCCCCCEEC GELVGSNLAARWGRFGFFGPLTIHPDHWGRGIASRLVAATMEAFDRWGIAQRGLFTFPDS CHHHCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC AKHISLYGKFGFVRQAPTRVMVRGTGATKGTAARASAMDADAFASAMLAAQALTAAIEPG CCEEEEEECCCCEECCCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCC LDLSSEIAAVAVQRLGDTLFLHDDGGLAGFAVCHVGAGSEAGSDAAYVKFGAVRPGAGAS CCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC GRFARLIDTCDAFAASAGAARLIAGVNAARNEALRMMVDAGFAPMIEGVAMQQPDRPGFN CHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC RPDCFVIDDWR CCCEEEEECCC >Mature Secondary Structure MIVDIAPLGEGDLATADRIFRLAFGTFLGLPDPVQFMGDATLVAPRWRAAPEASFGAYID CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCCCCCCCCCEEC GELVGSNLAARWGRFGFFGPLTIHPDHWGRGIASRLVAATMEAFDRWGIAQRGLFTFPDS CHHHCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC AKHISLYGKFGFVRQAPTRVMVRGTGATKGTAARASAMDADAFASAMLAAQALTAAIEPG CCEEEEEECCCCEECCCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCC LDLSSEIAAVAVQRLGDTLFLHDDGGLAGFAVCHVGAGSEAGSDAAYVKFGAVRPGAGAS CCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC GRFARLIDTCDAFAASAGAARLIAGVNAARNEALRMMVDAGFAPMIEGVAMQQPDRPGFN CHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC RPDCFVIDDWR CCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA