Click here to switch to the map view.

The map label for this gene is 103488266

Identifier: 103488266

GI number: 103488266

Start: 2951638

End: 2952249

Strand: Direct

Name: 103488266

Synonym: Sala_2789

Alternate gene names: NA

Gene position: 2951638-2952249 (Clockwise)

Preceding gene: 103488265

Following gene: 103488267

Centisome position: 88.24

GC content: 69.12

Gene sequence:

>612_bases
ATGGGGATTCGCACAAACCAGCGCCGCCGGACGCGCAAGGATCTGCTCGAGGCGGCGGCGCGGCTGATCGACGAAGGGCG
GATGCCGACGCTCGAGGAAGTGGCCGCCGAAGCGCTCGTCGCGCGCGCGACCGCCTATCGCTATTTTCCGAACGTCGAGG
CGTTGCTGCGCGAAGCCGCGCTCGACATCGCCGTGCCCGAGCCCGCGACGCTCTTCGACGCTGCGGCGCCCGCAGACCCG
GTGGCGCGCGCGCAGCGCGTCGACACGGCGCTTCACGACATGGTGTGCGCCAATGAATCGGCGCTTCGGCTGATGCTCGC
GCATACGCTCGAACGCAGCGCCACGCGCGAGAAGGCGAGCAGTGTGCCGCTGCGACAGAATCGCCGCGCAGCGCTGATTG
ACGCGGCGCTCGAACCACTTGCGGAGACACTCGCCCCCGCCGCGCACGACCGGCTGGCCAAGGCGCTCGGCCTGCTCGTC
GGAACCGAAGCCTTCATCGCCTGCAAGGATGTGCTGCAACTAGGCGATGCCGAAGCGCGCGCGGTCAAGGCGTGGGCGAT
CGGCGCGCTCGTCGAGGTGGCCATGAAACAGTCCCGGAGCAAGAGCAAATGA

Upstream 100 bases:

>100_bases
CTGCTGCACGTCGTCCAGTTTCGACCCAACGGTGCGATCGCGCGGGAAAATGTCTGGATCGACCTCGCTGCGATCCAGCA
ACAGCTCGCCTTGGGCTGAC

Downstream 100 bases:

>100_bases
TCGTCGACATCGCGCCGCTCGGCGAAGGCGACCTGGCCACCGCCGACCGGATCTTCCGCCTTGCCTTCGGCACCTTTCTC
GGCCTTCCCGATCCGGTACA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MGIRTNQRRRTRKDLLEAAARLIDEGRMPTLEEVAAEALVARATAYRYFPNVEALLREAALDIAVPEPATLFDAAAPADP
VARAQRVDTALHDMVCANESALRLMLAHTLERSATREKASSVPLRQNRRAALIDAALEPLAETLAPAAHDRLAKALGLLV
GTEAFIACKDVLQLGDAEARAVKAWAIGALVEVAMKQSRSKSK

Sequences:

>Translated_203_residues
MGIRTNQRRRTRKDLLEAAARLIDEGRMPTLEEVAAEALVARATAYRYFPNVEALLREAALDIAVPEPATLFDAAAPADP
VARAQRVDTALHDMVCANESALRLMLAHTLERSATREKASSVPLRQNRRAALIDAALEPLAETLAPAAHDRLAKALGLLV
GTEAFIACKDVLQLGDAEARAVKAWAIGALVEVAMKQSRSKSK
>Mature_202_residues
GIRTNQRRRTRKDLLEAAARLIDEGRMPTLEEVAAEALVARATAYRYFPNVEALLREAALDIAVPEPATLFDAAAPADPV
ARAQRVDTALHDMVCANESALRLMLAHTLERSATREKASSVPLRQNRRAALIDAALEPLAETLAPAAHDRLAKALGLLVG
TEAFIACKDVLQLGDAEARAVKAWAIGALVEVAMKQSRSKSK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21926; Mature: 21794

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRTNQRRRTRKDLLEAAARLIDEGRMPTLEEVAAEALVARATAYRYFPNVEALLREAA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LDIAVPEPATLFDAAAPADPVARAQRVDTALHDMVCANESALRLMLAHTLERSATREKAS
HHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SVPLRQNRRAALIDAALEPLAETLAPAAHDRLAKALGLLVGTEAFIACKDVLQLGDAEAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVKAWAIGALVEVAMKQSRSKSK
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GIRTNQRRRTRKDLLEAAARLIDEGRMPTLEEVAAEALVARATAYRYFPNVEALLREAA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LDIAVPEPATLFDAAAPADPVARAQRVDTALHDMVCANESALRLMLAHTLERSATREKAS
HHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SVPLRQNRRAALIDAALEPLAETLAPAAHDRLAKALGLLVGTEAFIACKDVLQLGDAEAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVKAWAIGALVEVAMKQSRSKSK
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA