Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103488041

Identifier: 103488041

GI number: 103488041

Start: 2702699

End: 2703064

Strand: Direct

Name: 103488041

Synonym: Sala_2563

Alternate gene names: NA

Gene position: 2702699-2703064 (Clockwise)

Preceding gene: 103488039

Following gene: 103488043

Centisome position: 80.79

GC content: 61.75

Gene sequence:

>366_bases
TTGATGCGGAGCGGTTCACGAGGCGGAGCGGGAACAAAGGGAGCAGTCCTGTTGACGCTTGGAGGTGTTACGGCCGCCTT
TGGCGTGGCTGCTTGCTGCGCCTTGCCTATCCTGTTGACGACAGCGGGGATTAGTGCCGCCTGGCTCGGCGGAATTTCGA
TGGCGACGGGTCCTTATCGCGATCTTCTGCTGTGGCTGAGCGCGCTCAGCCTCGCCGGAGGCACGCTCCTGCTCTGGCGG
ATGCAACGTTCTGCCGACTCTTGTGATTCAGAACGTGCCTGCACCCCGGTGTGGCTGCGCTTGATCCTCTTCATCGGCCT
AATCGCCGGCGCAGTCCTGCTTTGGCTCGGCTATTCCTATGTCTGA

Upstream 100 bases:

>100_bases
GATCGTCTCTCCGATCACGCGCGCCTCCTCCGAAAATAATAGCTTGAGTCTGTAGCTACTACAGACGGTATGACCTCCTC
ATGGAAGATTCAAGGAGTCG

Downstream 100 bases:

>100_bases
GCAGGCGCCCCAGCTCGAATCGACGCTCACCTGCCCGCACTGCGGCTTCGTAGAAACAGAGATCATGCCGACCAACGCAT
GCCAATATTTCTACGACTGC

Product: mercuric ion transport protein, MerT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MMRSGSRGGAGTKGAVLLTLGGVTAAFGVAACCALPILLTTAGISAAWLGGISMATGPYRDLLLWLSALSLAGGTLLLWR
MQRSADSCDSERACTPVWLRLILFIGLIAGAVLLWLGYSYV

Sequences:

>Translated_121_residues
MMRSGSRGGAGTKGAVLLTLGGVTAAFGVAACCALPILLTTAGISAAWLGGISMATGPYRDLLLWLSALSLAGGTLLLWR
MQRSADSCDSERACTPVWLRLILFIGLIAGAVLLWLGYSYV
>Mature_121_residues
MMRSGSRGGAGTKGAVLLTLGGVTAAFGVAACCALPILLTTAGISAAWLGGISMATGPYRDLLLWLSALSLAGGTLLLWR
MQRSADSCDSERACTPVWLRLILFIGLIAGAVLLWLGYSYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12520; Mature: 12520

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSGSRGGAGTKGAVLLTLGGVTAAFGVAACCALPILLTTAGISAAWLGGISMATGPYR
CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHH
DLLLWLSALSLAGGTLLLWRMQRSADSCDSERACTPVWLRLILFIGLIAGAVLLWLGYSY
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
V
C
>Mature Secondary Structure
MMRSGSRGGAGTKGAVLLTLGGVTAAFGVAACCALPILLTTAGISAAWLGGISMATGPYR
CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHH
DLLLWLSALSLAGGTLLLWRMQRSADSCDSERACTPVWLRLILFIGLIAGAVLLWLGYSY
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA