Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488043

Identifier: 103488043

GI number: 103488043

Start: 2704061

End: 2704393

Strand: Direct

Name: 103488043

Synonym: Sala_2565

Alternate gene names: NA

Gene position: 2704061-2704393 (Clockwise)

Preceding gene: 103488041

Following gene: 103488044

Centisome position: 80.83

GC content: 56.76

Gene sequence:

>333_bases
ATGTTGCTCGCGAAGCGCGATCGCTTGACGCATTTCTTCTTCCCGAGCCATCGATTGAAAAGGACCGCGGACGAGGGCAT
CAGCGAAGGACATGCCCGTAGGCCACGCTGGGCAAACGGCCACGAGGGAGCCCTTGTGCTCGTTGGCAATTTGCAATGCC
GCGTCGAGACGTTGCTCGATGGGGCCATCAGGGGTTGCGTCCACAACGAGGCTGCGCACTATCTCCGCGGTCATTTTCTT
CCCTCCTTTTCTCGGCTGATATTAGTTTTACTGATAACGGCGTTCGATCGCTCTGCTGGTTGCAGAATGGCGTTGCCGAT
GCTTTTCCAGTAG

Upstream 100 bases:

>100_bases
AGGTCGGCCAGCAAGCCGTGCTCGCGCAGGACGACGGCAGGATCAGCAATGCTGTCGCACCAATCGGTCGTGACTGAGGA
GCCTTGCGCCAAGCGATCGA

Downstream 100 bases:

>100_bases
ACAAAACTGGCGGCGACCCTCTCCACATCTATGTTGCAGAATGACTATTCTGACCTTGGCGAAATCATGCGCAATATTGG
CAGGATTCGATGTCCGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLLAKRDRLTHFFFPSHRLKRTADEGISEGHARRPRWANGHEGALVLVGNLQCRVETLLDGAIRGCVHNEAAHYLRGHFL
PSFSRLILVLLITAFDRSAGCRMALPMLFQ

Sequences:

>Translated_110_residues
MLLAKRDRLTHFFFPSHRLKRTADEGISEGHARRPRWANGHEGALVLVGNLQCRVETLLDGAIRGCVHNEAAHYLRGHFL
PSFSRLILVLLITAFDRSAGCRMALPMLFQ
>Mature_110_residues
MLLAKRDRLTHFFFPSHRLKRTADEGISEGHARRPRWANGHEGALVLVGNLQCRVETLLDGAIRGCVHNEAAHYLRGHFL
PSFSRLILVLLITAFDRSAGCRMALPMLFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12448; Mature: 12448

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAKRDRLTHFFFPSHRLKRTADEGISEGHARRPRWANGHEGALVLVGNLQCRVETLLD
CCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
GAIRGCVHNEAAHYLRGHFLPSFSRLILVLLITAFDRSAGCRMALPMLFQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLAKRDRLTHFFFPSHRLKRTADEGISEGHARRPRWANGHEGALVLVGNLQCRVETLLD
CCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
GAIRGCVHNEAAHYLRGHFLPSFSRLILVLLITAFDRSAGCRMALPMLFQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA