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The map label for this gene is yjbJ [H]

Identifier: 103487971

GI number: 103487971

Start: 2633048

End: 2633776

Strand: Reverse

Name: yjbJ [H]

Synonym: Sala_2492

Alternate gene names: 103487971

Gene position: 2633776-2633048 (Counterclockwise)

Preceding gene: 103487972

Following gene: 103487970

Centisome position: 78.73

GC content: 69.14

Gene sequence:

>729_bases
ATGACAGTTGTGCGGCTGCGGCGAAGTCTCACCATACTGTCTGTCCTGTGCTCGCCGATGCGCGTCGGCGCACGGCGCGC
GGCCATTTCGGCTGCGCTGCTTTTGCCGCCGATCTGCACTCCGGCTGCCGCCGCAGCGCAGTCGGAGCGCCATCCCTATG
CCGCTCCGGTCGCCGAAGCGGCGCAGCGCTTCGGTATCCCGGAGCTCTGGATCTGGCGCGTGATGCATGCCGAAAGCCGC
GGCCGTATCGGCGCCGTGTCGCACGCCGGCGCCATGGGGCTCATGCAGATCATGCCCGCAACATGGGCGCCGCTGACGGC
GCGCCACCGGCTCGGTTCGGACCCGTTCGACCCCCGCGCGAACATCCTCGCGGGCGCCGCCTATCTGCGCGCGATGTGGG
ACCGCTATGGCGATGTCCGGCTGATGCTCGCGGCCTATAATGCAGGTCCCGGCCGCGCCGATGCCTATGTCGCGGGGCGT
CGCGGACTGCCAGCCGAGACGCGCGCCTATGTCGCGAAGATTGCGCCCGAACTGCACGCGCCGCTTGGAACTTCTGCCGT
CGCTTCGCTTCCAAGAGGGTCGCCGGGCTGGCGCGATGCGGCCATTTTTGTTGCACCAGCGGCGGCGATCGACACTGCGC
GCCCGGCAGCTTCGGCAGGTGAAGCTGCCGCCATCCCGGACGCAGGTTCGCCGCTTTTCATTGCTCGGTCCGGGCAGCAT
CGGCCATGA

Upstream 100 bases:

>100_bases
CGCACCCTGTTCTGACGCGCACCGACGCCGAAGCATCGCTTCGCTGGCACCGCGCGAGCCCTTCCTTCGAACCAATTGCC
GACGAGATGGAGCAAGGACG

Downstream 100 bases:

>100_bases
TTGCGCGCCGATACCAGATCCTCCACGCTGGCCGCGATTGGGCCCCAATCGTTGCACCTTCCCTGGCAGGTCCCGGCATG
CAGGTGAGCTGGACTGGCAG

Product: lytic transglycosylase, catalytic

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTVVRLRRSLTILSVLCSPMRVGARRAAISAALLLPPICTPAAAAAQSERHPYAAPVAEAAQRFGIPELWIWRVMHAESR
GRIGAVSHAGAMGLMQIMPATWAPLTARHRLGSDPFDPRANILAGAAYLRAMWDRYGDVRLMLAAYNAGPGRADAYVAGR
RGLPAETRAYVAKIAPELHAPLGTSAVASLPRGSPGWRDAAIFVAPAAAIDTARPAASAGEAAAIPDAGSPLFIARSGQH
RP

Sequences:

>Translated_242_residues
MTVVRLRRSLTILSVLCSPMRVGARRAAISAALLLPPICTPAAAAAQSERHPYAAPVAEAAQRFGIPELWIWRVMHAESR
GRIGAVSHAGAMGLMQIMPATWAPLTARHRLGSDPFDPRANILAGAAYLRAMWDRYGDVRLMLAAYNAGPGRADAYVAGR
RGLPAETRAYVAKIAPELHAPLGTSAVASLPRGSPGWRDAAIFVAPAAAIDTARPAASAGEAAAIPDAGSPLFIARSGQH
RP
>Mature_241_residues
TVVRLRRSLTILSVLCSPMRVGARRAAISAALLLPPICTPAAAAAQSERHPYAAPVAEAAQRFGIPELWIWRVMHAESRG
RIGAVSHAGAMGLMQIMPATWAPLTARHRLGSDPFDPRANILAGAAYLRAMWDRYGDVRLMLAAYNAGPGRADAYVAGRR
GLPAETRAYVAKIAPELHAPLGTSAVASLPRGSPGWRDAAIFVAPAAAIDTARPAASAGEAAAIPDAGSPLFIARSGQHR
P

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 25432; Mature: 25300

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVRLRRSLTILSVLCSPMRVGARRAAISAALLLPPICTPAAAAAQSERHPYAAPVAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHH
AQRFGIPELWIWRVMHAESRGRIGAVSHAGAMGLMQIMPATWAPLTARHRLGSDPFDPRA
HHHCCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCH
NILAGAAYLRAMWDRYGDVRLMLAAYNAGPGRADAYVAGRRGLPAETRAYVAKIAPELHA
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
PLGTSAVASLPRGSPGWRDAAIFVAPAAAIDTARPAASAGEAAAIPDAGSPLFIARSGQH
CCCCHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC
RP
CC
>Mature Secondary Structure 
TVVRLRRSLTILSVLCSPMRVGARRAAISAALLLPPICTPAAAAAQSERHPYAAPVAEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHH
AQRFGIPELWIWRVMHAESRGRIGAVSHAGAMGLMQIMPATWAPLTARHRLGSDPFDPRA
HHHCCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCH
NILAGAAYLRAMWDRYGDVRLMLAAYNAGPGRADAYVAGRRGLPAETRAYVAKIAPELHA
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
PLGTSAVASLPRGSPGWRDAAIFVAPAAAIDTARPAASAGEAAAIPDAGSPLFIARSGQH
CCCCHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC
RP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]