Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487970

Identifier: 103487970

GI number: 103487970

Start: 2632330

End: 2632827

Strand: Reverse

Name: 103487970

Synonym: Sala_2491

Alternate gene names: NA

Gene position: 2632827-2632330 (Counterclockwise)

Preceding gene: 103487971

Following gene: 103487969

Centisome position: 78.71

GC content: 65.26

Gene sequence:

>498_bases
GTGCATCCAGCTTTTGTCCCACTTTTCGAGCGGCGGATCCGACGTCACGTCGGCTGGCCTAGGCAGAAGCTTAGGAATTC
CGCAACTTTTGGAGACGTCGCATCGGCGTCGCGATCGGGCCTCGCGATGAAGCTGGTGAGGCATACGGTTCGTCTGCCGG
TCGAGGTCGACAAGGCGGTAGGCGAGCTTGCGAAGGCGAAAGGCGACACCGCCTATGCGACCCTCGCGACCTGCGTCGAA
GCCGGGCTTGCGGCGCTGTCAAATCCTATGGCGGACGGGTCCGGCAATCGCGAACTCGTCGCCGAACTCGTCTCGATCGG
TACCCGGCTGCTCGCCGTCGAGCGCATGCTGGACCGCACCCTGTTCACTGCCTGCGCTGCCTATTGCTACGCGCGCAGCG
CCGCCTTCGACGGCGGCAAGAGCGACGAGGAGATAAGCGCCGAGATCGGCCGTGCCTATGATCGCCAGCGGCGCCGTGCC
GATGAGGGCGGGTCGTGA

Upstream 100 bases:

>100_bases
GAGCCCGGCTCAAGTCTGAAGCCATAGTCTTTCAGGCAAAGAAGTTGGGCCGCGATGCTACGCATCGGACCCATAATTTG
AATACACACCTCACGCACGG

Downstream 100 bases:

>100_bases
TGCGCGATCGGGACCAGCGTATCCATGCCGACGCGCTGCGGCGCCACTGGCGATCGAACCAGGTCCGGCGGTTCAAGCGC
CATGCGATCATCTTCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MHPAFVPLFERRIRRHVGWPRQKLRNSATFGDVASASRSGLAMKLVRHTVRLPVEVDKAVGELAKAKGDTAYATLATCVE
AGLAALSNPMADGSGNRELVAELVSIGTRLLAVERMLDRTLFTACAAYCYARSAAFDGGKSDEEISAEIGRAYDRQRRRA
DEGGS

Sequences:

>Translated_165_residues
MHPAFVPLFERRIRRHVGWPRQKLRNSATFGDVASASRSGLAMKLVRHTVRLPVEVDKAVGELAKAKGDTAYATLATCVE
AGLAALSNPMADGSGNRELVAELVSIGTRLLAVERMLDRTLFTACAAYCYARSAAFDGGKSDEEISAEIGRAYDRQRRRA
DEGGS
>Mature_165_residues
MHPAFVPLFERRIRRHVGWPRQKLRNSATFGDVASASRSGLAMKLVRHTVRLPVEVDKAVGELAKAKGDTAYATLATCVE
AGLAALSNPMADGSGNRELVAELVSIGTRLLAVERMLDRTLFTACAAYCYARSAAFDGGKSDEEISAEIGRAYDRQRRRA
DEGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17869; Mature: 17869

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPAFVPLFERRIRRHVGWPRQKLRNSATFGDVASASRSGLAMKLVRHTVRLPVEVDKAV
CCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GELAKAKGDTAYATLATCVEAGLAALSNPMADGSGNRELVAELVSIGTRLLAVERMLDRT
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LFTACAAYCYARSAAFDGGKSDEEISAEIGRAYDRQRRRADEGGS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHPAFVPLFERRIRRHVGWPRQKLRNSATFGDVASASRSGLAMKLVRHTVRLPVEVDKAV
CCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GELAKAKGDTAYATLATCVEAGLAALSNPMADGSGNRELVAELVSIGTRLLAVERMLDRT
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LFTACAAYCYARSAAFDGGKSDEEISAEIGRAYDRQRRRADEGGS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA