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The map label for this gene is trbG [H]

Identifier: 103487957

GI number: 103487957

Start: 2617173

End: 2618024

Strand: Reverse

Name: trbG [H]

Synonym: Sala_2478

Alternate gene names: 103487957

Gene position: 2618024-2617173 (Counterclockwise)

Preceding gene: 103487958

Following gene: 103487956

Centisome position: 78.26

GC content: 67.84

Gene sequence:

>852_bases
ATGAAGGCCTTTTCCCGTATCTCGCTGCTCGCGGGTGTCGCTGCGCTCGGCGTGGCGTCGCCATCCCTCGGGGCTGAAGG
TCGCGATCCGAAACAGAATGTCGGGCGCGCCAACGACGCGGCGCGCGTGCAGCCCGATCGCGCGACCTTCCTCAACGCGA
TCCAGAAATATGCCTGGGCCGAGGGCGCGCTGTATCAGGTCTATGCGTCGCCGGGGCAGGTCACTGACATCGTGCTGCAG
GAGGGCGAGGAGCTTGTCGGCCCGGGGCCGGTGGCTGCCGGCGACACGGTCCGCTGGATCATCGGCGACACGGTGAGCGG
CAGCGGAGCGAGTCGCCGCGTGCACATCCTCGTGAAGCCAACGCGGGCCGACATCATGACGAATATCGTCATCAACACGA
GCCGCCGGACCTATCACATCGAGCTGCGCGCGACGCCCGCGACCTATATGGCGTCGGTGTCCTGGTCCTATCCGGAAGCC
GAGCTGATCGCGCTGCGTGCTGCGGAGGTGGAGCGTGAGCGGGCGGCGCCGGTCGCGGCAGGGCTCGACCTTGGCGCCCT
CAACTTTCGTTACCGGCTGTCGGGCGACAAGCCGGATTGGCGACCGGTGCGCGTTTTCGATGACGGGCGCCAGCTCTTCA
TCGAGTTCGGCGAAGGCGTCGCAACGGGCGATATGCCCCCGCTGTTCGCGGTCGGTGAAAAGGGCGAGGCCGAGCTCGTC
AACTACCGCGTCCATGGCCGCTTCATGATCGCCGATCGCCTGTTCGAACGCGGACAGCTTCGGATGGGTGCCGGACGCGC
GGCGCGCGAGGTGGTTATCGAGCGCGTCGGCCGCGTGCGGGGGCGCTCGTGA

Upstream 100 bases:

>100_bases
TTACCGTCACCCATGTGCCGCCGCGCACTCCCGATGCCCTCCGCCGCAATCCGCTTGGAGTGTTTGTTTCCGCTATTTCC
TGGTCGAAGGAGCTCAGCCA

Downstream 100 bases:

>100_bases
GCGCGCCGGAACGGGACGAGGAGGAGGTGGTGGAACTCGTCGCTGTCCCTCCCGCAAGCGGCGAGCCCTTTCGGCTTGGT
GCCGAGCCGCCGAGCGTCAT

Product: conjugal transfer protein TrbG/VirB9/CagX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKAFSRISLLAGVAALGVASPSLGAEGRDPKQNVGRANDAARVQPDRATFLNAIQKYAWAEGALYQVYASPGQVTDIVLQ
EGEELVGPGPVAAGDTVRWIIGDTVSGSGASRRVHILVKPTRADIMTNIVINTSRRTYHIELRATPATYMASVSWSYPEA
ELIALRAAEVERERAAPVAAGLDLGALNFRYRLSGDKPDWRPVRVFDDGRQLFIEFGEGVATGDMPPLFAVGEKGEAELV
NYRVHGRFMIADRLFERGQLRMGAGRAAREVVIERVGRVRGRS

Sequences:

>Translated_283_residues
MKAFSRISLLAGVAALGVASPSLGAEGRDPKQNVGRANDAARVQPDRATFLNAIQKYAWAEGALYQVYASPGQVTDIVLQ
EGEELVGPGPVAAGDTVRWIIGDTVSGSGASRRVHILVKPTRADIMTNIVINTSRRTYHIELRATPATYMASVSWSYPEA
ELIALRAAEVERERAAPVAAGLDLGALNFRYRLSGDKPDWRPVRVFDDGRQLFIEFGEGVATGDMPPLFAVGEKGEAELV
NYRVHGRFMIADRLFERGQLRMGAGRAAREVVIERVGRVRGRS
>Mature_283_residues
MKAFSRISLLAGVAALGVASPSLGAEGRDPKQNVGRANDAARVQPDRATFLNAIQKYAWAEGALYQVYASPGQVTDIVLQ
EGEELVGPGPVAAGDTVRWIIGDTVSGSGASRRVHILVKPTRADIMTNIVINTSRRTYHIELRATPATYMASVSWSYPEA
ELIALRAAEVERERAAPVAAGLDLGALNFRYRLSGDKPDWRPVRVFDDGRQLFIEFGEGVATGDMPPLFAVGEKGEAELV
NYRVHGRFMIADRLFERGQLRMGAGRAAREVVIERVGRVRGRS

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 30774; Mature: 30774

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFSRISLLAGVAALGVASPSLGAEGRDPKQNVGRANDAARVQPDRATFLNAIQKYAWA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
EGALYQVYASPGQVTDIVLQEGEELVGPGPVAAGDTVRWIIGDTVSGSGASRRVHILVKP
CCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC
TRADIMTNIVINTSRRTYHIELRATPATYMASVSWSYPEAELIALRAAEVERERAAPVAA
CHHCEEEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCHHEEEEHHHHHHHHHCCCEEC
GLDLGALNFRYRLSGDKPDWRPVRVFDDGRQLFIEFGEGVATGDMPPLFAVGEKGEAELV
CCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEEEECCCEECCCCCCEEEECCCCCCEEE
NYRVHGRFMIADRLFERGQLRMGAGRAAREVVIERVGRVRGRS
EEEEEEEEEEHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAFSRISLLAGVAALGVASPSLGAEGRDPKQNVGRANDAARVQPDRATFLNAIQKYAWA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
EGALYQVYASPGQVTDIVLQEGEELVGPGPVAAGDTVRWIIGDTVSGSGASRRVHILVKP
CCCEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC
TRADIMTNIVINTSRRTYHIELRATPATYMASVSWSYPEAELIALRAAEVERERAAPVAA
CHHCEEEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCHHEEEEHHHHHHHHHCCCEEC
GLDLGALNFRYRLSGDKPDWRPVRVFDDGRQLFIEFGEGVATGDMPPLFAVGEKGEAELV
CCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEEEECCCEECCCCCCEEEECCCCCCEEE
NYRVHGRFMIADRLFERGQLRMGAGRAAREVVIERVGRVRGRS
EEEEEEEEEEHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]