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The map label for this gene is trbI [H]

Identifier: 103487956

GI number: 103487956

Start: 2615962

End: 2617143

Strand: Reverse

Name: trbI [H]

Synonym: Sala_2477

Alternate gene names: 103487956

Gene position: 2617143-2615962 (Counterclockwise)

Preceding gene: 103487957

Following gene: 103487955

Centisome position: 78.24

GC content: 69.2

Gene sequence:

>1182_bases
GTGGAACTCGTCGCTGTCCCTCCCGCAAGCGGCGAGCCCTTTCGGCTTGGTGCCGAGCCGCCGAGCGTCATGCGCCTGTC
GCGCAAGGCGCTGGCCATTCTAGGCGCCGCATTGGGGACCGCTATCGGCGGCGCGCTTCTCTATGCGCTGCAGCCCGCCA
AGCTCAAGGTGGCCGAGAATCTCTACGATAGCGACCGTGCGAACAAGTCCGAGCTCGTGACCGGAGCGCCGGGCGATTAT
GGCAAGATCCCGAAGCTCGGCGAGCCGCTCCCTGGCGATCTCGGGCGGCCGATCCTTGCCGCGCGCGAGAATGGCGAGAC
CGTCCCGGTGCCTCCGATCGGCGCGCCTCCGCCGCCAGACCCGCGAGCCGCTGCGGCGGAGCAAGCCCGCGCGCGTGCGG
CCCAGGAACGCGAAAGCGCGCGCGCCAGCCAGCTCTTCCTCGGCGGTGGGGCGTCGGTCACCTCGCAGCTGCCGGTGCTT
GGCGAAGGCGTGTTGCGACCGGCGCCCGACAATCTGCAAGCCAACCCGACCGCGGCCGACAAGCGCAAGGGCTTCCTCAG
TGGTGATGGCGCCGGTCCGGCAGAGAGCATGGCGCGGCTCGTCCAGCCCTCATCGCCGCATCTGGTCCAGGCGGGCAGCG
TGATTCCGGCGGCACTCATCACCGGCATCCGGTCCGACTTGCCGGGCCAGATCACCGCGCAGGTGACCCAGAATGTTTAC
GACAGCCCCACCGGGCGCATCCTGCTCATTCCGCAGGGTGCTCGGCTGATCGGCGAATATGGCAGCGAGATCGCCGACGG
GCAGAGCCGGGTCCTTCTCGCATGGGACCGGCTGATCCTGCCGGGCGGGCGCTCGATTGCTCTCGATCGCCTGCCGGGCG
CCGATGCGGCCGGCATGGCCGGGCTTGCCGACCGGACCGATTATCATTGGGGCCATATGCTGAAGGCCACGCTGGTTTCG
ACGCTGCTGGGCGTCGGCGCCGAACTCGGCGCCGACGACGAGGATCGCCTCGTTCGGGCGGTGCGGCGTGGCGCGCAGGA
CAGCATCAACGAGACGGGACGGCAACTCGTCGAACGCCAGCTTGGAGTGAAGCCGACCATCACGGTTCGGTCAGGCGCGA
TCCTCCGCGTCATTGTGACGCGGGACATCATCCTCGAGCCTCTGGATCGAGGCGGACGGTGA

Upstream 100 bases:

>100_bases
GGATGGGTGCCGGACGCGCGGCGCGCGAGGTGGTTATCGAGCGCGTCGGCCGCGTGCGGGGGCGCTCGTGAGCGCGCCGG
AACGGGACGAGGAGGAGGTG

Downstream 100 bases:

>100_bases
CCCGGCTCAGGCTCGGTCCGATCGCCGAAGACAAGCCGGTCAAACTGACTCTCGAATTGCCCGGGCTGCTGGCGCGCGAT
GTGGCGGACTATGCCGCCGT

Product: conjugation TrbI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MELVAVPPASGEPFRLGAEPPSVMRLSRKALAILGAALGTAIGGALLYALQPAKLKVAENLYDSDRANKSELVTGAPGDY
GKIPKLGEPLPGDLGRPILAARENGETVPVPPIGAPPPPDPRAAAAEQARARAAQERESARASQLFLGGGASVTSQLPVL
GEGVLRPAPDNLQANPTAADKRKGFLSGDGAGPAESMARLVQPSSPHLVQAGSVIPAALITGIRSDLPGQITAQVTQNVY
DSPTGRILLIPQGARLIGEYGSEIADGQSRVLLAWDRLILPGGRSIALDRLPGADAAGMAGLADRTDYHWGHMLKATLVS
TLLGVGAELGADDEDRLVRAVRRGAQDSINETGRQLVERQLGVKPTITVRSGAILRVIVTRDIILEPLDRGGR

Sequences:

>Translated_393_residues
MELVAVPPASGEPFRLGAEPPSVMRLSRKALAILGAALGTAIGGALLYALQPAKLKVAENLYDSDRANKSELVTGAPGDY
GKIPKLGEPLPGDLGRPILAARENGETVPVPPIGAPPPPDPRAAAAEQARARAAQERESARASQLFLGGGASVTSQLPVL
GEGVLRPAPDNLQANPTAADKRKGFLSGDGAGPAESMARLVQPSSPHLVQAGSVIPAALITGIRSDLPGQITAQVTQNVY
DSPTGRILLIPQGARLIGEYGSEIADGQSRVLLAWDRLILPGGRSIALDRLPGADAAGMAGLADRTDYHWGHMLKATLVS
TLLGVGAELGADDEDRLVRAVRRGAQDSINETGRQLVERQLGVKPTITVRSGAILRVIVTRDIILEPLDRGGR
>Mature_393_residues
MELVAVPPASGEPFRLGAEPPSVMRLSRKALAILGAALGTAIGGALLYALQPAKLKVAENLYDSDRANKSELVTGAPGDY
GKIPKLGEPLPGDLGRPILAARENGETVPVPPIGAPPPPDPRAAAAEQARARAAQERESARASQLFLGGGASVTSQLPVL
GEGVLRPAPDNLQANPTAADKRKGFLSGDGAGPAESMARLVQPSSPHLVQAGSVIPAALITGIRSDLPGQITAQVTQNVY
DSPTGRILLIPQGARLIGEYGSEIADGQSRVLLAWDRLILPGGRSIALDRLPGADAAGMAGLADRTDYHWGHMLKATLVS
TLLGVGAELGADDEDRLVRAVRRGAQDSINETGRQLVERQLGVKPTITVRSGAILRVIVTRDIILEPLDRGGR

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40862; Mature: 40862

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVAVPPASGEPFRLGAEPPSVMRLSRKALAILGAALGTAIGGALLYALQPAKLKVAEN
CCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LYDSDRANKSELVTGAPGDYGKIPKLGEPLPGDLGRPILAARENGETVPVPPIGAPPPPD
HHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PRAAAAEQARARAAQERESARASQLFLGGGASVTSQLPVLGEGVLRPAPDNLQANPTAAD
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHH
KRKGFLSGDGAGPAESMARLVQPSSPHLVQAGSVIPAALITGIRSDLPGQITAQVTQNVY
HHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
DSPTGRILLIPQGARLIGEYGSEIADGQSRVLLAWDRLILPGGRSIALDRLPGADAAGMA
CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCC
GLADRTDYHWGHMLKATLVSTLLGVGAELGADDEDRLVRAVRRGAQDSINETGRQLVERQ
CCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LGVKPTITVRSGAILRVIVTRDIILEPLDRGGR
HCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCC
>Mature Secondary Structure
MELVAVPPASGEPFRLGAEPPSVMRLSRKALAILGAALGTAIGGALLYALQPAKLKVAEN
CCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LYDSDRANKSELVTGAPGDYGKIPKLGEPLPGDLGRPILAARENGETVPVPPIGAPPPPD
HHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PRAAAAEQARARAAQERESARASQLFLGGGASVTSQLPVLGEGVLRPAPDNLQANPTAAD
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHH
KRKGFLSGDGAGPAESMARLVQPSSPHLVQAGSVIPAALITGIRSDLPGQITAQVTQNVY
HHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
DSPTGRILLIPQGARLIGEYGSEIADGQSRVLLAWDRLILPGGRSIALDRLPGADAAGMA
CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCC
GLADRTDYHWGHMLKATLVSTLLGVGAELGADDEDRLVRAVRRGAQDSINETGRQLVERQ
CCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LGVKPTITVRSGAILRVIVTRDIILEPLDRGGR
HCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]