| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487955
Identifier: 103487955
GI number: 103487955
Start: 2615744
End: 2615965
Strand: Reverse
Name: 103487955
Synonym: Sala_2476
Alternate gene names: NA
Gene position: 2615965-2615744 (Counterclockwise)
Preceding gene: 103487956
Following gene: 103487954
Centisome position: 78.2
GC content: 67.57
Gene sequence:
>222_bases GTGACCCGGCTCAGGCTCGGTCCGATCGCCGAAGACAAGCCGGTCAAACTGACTCTCGAATTGCCCGGGCTGCTGGCGCG CGATGTGGCGGACTATGCCGCCGTCCATGCGGCGCAGACCGGCCTCGCGACCCCCTTGCCACCTGAACGGCTCATCCCTG CCATGGTCGAGCGCTTCATCGCAGCCGATCGGGGTTTTGCGCGCCTGCGTTCGAGGCGCTGA
Upstream 100 bases:
>100_bases AGCTTGGAGTGAAGCCGACCATCACGGTTCGGTCAGGCGCGATCCTCCGCGTCATTGTGACGCGGGACATCATCCTCGAG CCTCTGGATCGAGGCGGACG
Downstream 100 bases:
>100_bases GCCTGCGTAGCCGCGCGTGTCTTTTTATATGCCGGACTTGCACTTCCGATCCGAACGACGCAGACCGGACGCATTCCTTG GGTGTCAGGGGGCGGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTRLRLGPIAEDKPVKLTLELPGLLARDVADYAAVHAAQTGLATPLPPERLIPAMVERFIAADRGFARLRSRR
Sequences:
>Translated_73_residues MTRLRLGPIAEDKPVKLTLELPGLLARDVADYAAVHAAQTGLATPLPPERLIPAMVERFIAADRGFARLRSRR >Mature_72_residues TRLRLGPIAEDKPVKLTLELPGLLARDVADYAAVHAAQTGLATPLPPERLIPAMVERFIAADRGFARLRSRR
Specific function: Unknown
COG id: COG5639
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8032; Mature: 7900
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLRLGPIAEDKPVKLTLELPGLLARDVADYAAVHAAQTGLATPLPPERLIPAMVERFI CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AADRGFARLRSRR HCCCCHHHHHCCC >Mature Secondary Structure TRLRLGPIAEDKPVKLTLELPGLLARDVADYAAVHAAQTGLATPLPPERLIPAMVERFI CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AADRGFARLRSRR HCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA