Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487950

Identifier: 103487950

GI number: 103487950

Start: 2610829

End: 2611191

Strand: Reverse

Name: 103487950

Synonym: Sala_2471

Alternate gene names: NA

Gene position: 2611191-2610829 (Counterclockwise)

Preceding gene: 103487951

Following gene: 103487949

Centisome position: 78.06

GC content: 60.61

Gene sequence:

>363_bases
ATGATCAGGAAAAGCATCATGATCGCGGCGGCAGGCATTTCGATGTTCGCGGCCGCCCCGGCGTTCGCCCAGGGCATCGG
GCACAGTTTCTTCATGCGGGGCTCGATCGTCGAGACCAGCGCGGGCAATACCGTGGTCTGCATCGGCAAGGCCGATGGCG
CCGAAGTCGGCCAGACGCTCGAAGTCTATCGAAACGTCCGGCATCCGGGTCCCGTGGCATCGAAGGGCAATGTTGCTCCC
TTCCATCGCAAGCGGGTCGGCCAGGTGACCATCGACCATATTTACGATGACCATTTCGCCCATGTCACGATCGCCGAAGG
CAAGCTGGCCAAGAACGATATCGTCGAGCTTCGCAAGGACTGA

Upstream 100 bases:

>100_bases
ACACTACGTATGTCGAGCTTGGACTCTGGACCCTAGTCCTGTTGCCGAAGAACAGGATTCTTCGACAGGCAGTCAGGGCA
GCGGCCCGAAGGAGTTCAAG

Downstream 100 bases:

>100_bases
GTCCGGCCCTTTCCGTAGCGCGAGCGAGGACCGGGGGAGATGTTCCCCTCCTCCTCGCGCGCGGATAGGACCACGCCGCG
TCGTGGCCCGGATGTCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTLEVYRNVRHPGPVASKGNVAP
FHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD

Sequences:

>Translated_120_residues
MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTLEVYRNVRHPGPVASKGNVAP
FHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD
>Mature_120_residues
MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTLEVYRNVRHPGPVASKGNVAP
FHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12858; Mature: 12858

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTL
CCCCCEEEEECCHHHHHHCHHHHHHCCCCEEECCCEEEECCCCEEEEEECCCCCHHHHHH
EVYRNVRHPGPVASKGNVAPFHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD
HHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure
MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTL
CCCCCEEEEECCHHHHHHCHHHHHHCCCCEEECCCEEEECCCCEEEEEECCCCCHHHHHH
EVYRNVRHPGPVASKGNVAPFHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD
HHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA