| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487950
Identifier: 103487950
GI number: 103487950
Start: 2610829
End: 2611191
Strand: Reverse
Name: 103487950
Synonym: Sala_2471
Alternate gene names: NA
Gene position: 2611191-2610829 (Counterclockwise)
Preceding gene: 103487951
Following gene: 103487949
Centisome position: 78.06
GC content: 60.61
Gene sequence:
>363_bases ATGATCAGGAAAAGCATCATGATCGCGGCGGCAGGCATTTCGATGTTCGCGGCCGCCCCGGCGTTCGCCCAGGGCATCGG GCACAGTTTCTTCATGCGGGGCTCGATCGTCGAGACCAGCGCGGGCAATACCGTGGTCTGCATCGGCAAGGCCGATGGCG CCGAAGTCGGCCAGACGCTCGAAGTCTATCGAAACGTCCGGCATCCGGGTCCCGTGGCATCGAAGGGCAATGTTGCTCCC TTCCATCGCAAGCGGGTCGGCCAGGTGACCATCGACCATATTTACGATGACCATTTCGCCCATGTCACGATCGCCGAAGG CAAGCTGGCCAAGAACGATATCGTCGAGCTTCGCAAGGACTGA
Upstream 100 bases:
>100_bases ACACTACGTATGTCGAGCTTGGACTCTGGACCCTAGTCCTGTTGCCGAAGAACAGGATTCTTCGACAGGCAGTCAGGGCA GCGGCCCGAAGGAGTTCAAG
Downstream 100 bases:
>100_bases GTCCGGCCCTTTCCGTAGCGCGAGCGAGGACCGGGGGAGATGTTCCCCTCCTCCTCGCGCGCGGATAGGACCACGCCGCG TCGTGGCCCGGATGTCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTLEVYRNVRHPGPVASKGNVAP FHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD
Sequences:
>Translated_120_residues MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTLEVYRNVRHPGPVASKGNVAP FHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD >Mature_120_residues MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTLEVYRNVRHPGPVASKGNVAP FHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12858; Mature: 12858
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTL CCCCCEEEEECCHHHHHHCHHHHHHCCCCEEECCCEEEECCCCEEEEEECCCCCHHHHHH EVYRNVRHPGPVASKGNVAPFHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD HHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCCCCCHHHCCCC >Mature Secondary Structure MIRKSIMIAAAGISMFAAAPAFAQGIGHSFFMRGSIVETSAGNTVVCIGKADGAEVGQTL CCCCCEEEEECCHHHHHHCHHHHHHCCCCEEECCCEEEECCCCEEEEEECCCCCHHHHHH EVYRNVRHPGPVASKGNVAPFHRKRVGQVTIDHIYDDHFAHVTIAEGKLAKNDIVELRKD HHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA