Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487898

Identifier: 103487898

GI number: 103487898

Start: 2556595

End: 2557053

Strand: Direct

Name: 103487898

Synonym: Sala_2418

Alternate gene names: NA

Gene position: 2556595-2557053 (Clockwise)

Preceding gene: 103487896

Following gene: 103487905

Centisome position: 76.43

GC content: 68.41

Gene sequence:

>459_bases
ATGGTTATATCTCTCGCTGCGGCATCGAGCAGCGCCCGACCGCGCGGCATGCCGGGCGCGGCGATGCCGGACACTTCGCG
CAGCTTGTCCTCGACCGCCCGGGCGACATGCCGCGTCGGCACATGCTCCTTATTTTTTGTCCATATCGTGCCCGGCATGA
GGATCGGGTTCGGGTTCGACAGGTTTCGGCGCTTCCGGCGCGGCCTTTGCCCGCGGCGGCACAGCGGCCTTCGCGGCGGG
TTCTTGCTTGGGGCGGGATTTCTCCGGAGGCATCGCTTCTTCGGTCGGCGCCGCCGGGGCAGACGCGGCGGGCGGCTCGT
CCGCTACGGGCATGGTCTCGACCATTGCGGGCGGCTCACCGGCAGTGACCTCACTCTGTTCCGGTGTGACGTCGCTCTGC
TGCGCGGGCTCAGTGCCGCATCCTGCCAGAGCAAATATCAGCGCGGCGGCGCTCGCTAG

Upstream 100 bases:

>100_bases
TTTGCGAAAGCTCTCGGCTTCGCCACCGAGCTATCTTCGCGGCCTTGGCATGACCAGAAATAATCACCACTCATCGCTAT
AAACGAGATGGTTATTCCAT

Downstream 100 bases:

>100_bases
GGGAATGAATCTCGTCATATCTGTCTCCTCTTCGTGTCGGCAGGTCATGCGCGGAATTCAGAAACCTTGCCGTCGCTGCC
GAATGCCATCACTTCGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFDRFRRFRRGLCPRRHSGLRGG
FLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLTGSDLTLFRCDVALLRGLSAASCQSKYQRGGAR

Sequences:

>Translated_152_residues
MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFDRFRRFRRGLCPRRHSGLRGG
FLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLTGSDLTLFRCDVALLRGLSAASCQSKYQRGGAR
>Mature_152_residues
MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFDRFRRFRRGLCPRRHSGLRGG
FLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLTGSDLTLFRCDVALLRGLSAASCQSKYQRGGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16731; Mature: 16731

Theoretical pI: Translated: 12.56; Mature: 12.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFD
CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCHH
RFRRFRRGLCPRRHSGLRGGFLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLT
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCC
GSDLTLFRCDVALLRGLSAASCQSKYQRGGAR
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFD
CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCHH
RFRRFRRGLCPRRHSGLRGGFLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLT
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCC
GSDLTLFRCDVALLRGLSAASCQSKYQRGGAR
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA