| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487886
Identifier: 103487886
GI number: 103487886
Start: 2540216
End: 2540971
Strand: Direct
Name: 103487886
Synonym: Sala_2406
Alternate gene names: NA
Gene position: 2540216-2540971 (Clockwise)
Preceding gene: 103487885
Following gene: 103487887
Centisome position: 75.94
GC content: 67.06
Gene sequence:
>756_bases ATGGCTTCCCCCACCTTTTCGCGCCTGCGCGCGCTCGCCGATCCCACCCATCTTCCGGCGCTCAGCGCGGAATATATCCG CTCGCAGCCCGCGCTCGGCCTCGGCCCGCTCGACCCAGCGCCGCGCATCCTGCTGCTCTACGGCAGCTTGCGCGAACGCT CCTATTCGCGGCTCGTCGTCGAAGAGACCGCGCGCCTGCTCCAGCTCTTCGGCTGCGAGACGCGCATCTTCGATCCGTCG GACCTGCCGCTGCCCGATTTGATCGCCGACGACGACCACCCGGCCGTCGAGGAACTGCGCCAGCATTCGCTCTGGTCCGA GGGCCAGGTCTGGTGCAGCCCCGAACGGCATGGCCAGATCACCGGCATCATGAAGGCGCAGGTCGATCACCTGCCGCTCG CATACAAAGGGCTACGCCCGACACAGGGCCGCACCCTCGCGGTGATGCAGGTGTCGGCGGGGTCGCAATCGTTCAACAGC GTCAATACGCTCCGCATCCTCGGCCGCTGGATGCGGATGATCACCATCCCCAACCAGTCGAGCGTCGCCAAGGCTTATGC CGAGTTCGACGAGGCGGGCCGGATGCTCCCGTCGAGCTATTACGACCGGATCGTCGACGTTGCGGAGGAACTTGTGTGCT TCACCGTGCTGACGCGCGGCCATGCCACGCAGCTTGTCGACCGCTATTCGGAACGCAAGGACCGCGCCGAACCCGTCGTG ACGCCGGCGCGATTGGCGGGGCTGCCGGGAGCCTGA
Upstream 100 bases:
>100_bases CGCTCGTCGAAGTTCCCGTGCTCATCCTGCTGGTGAGCGTCGCCTTCTGGTTCGGACGCCGCTGGTTCCCGGCATCCACC CCCGCGAAAGACTGATTGTC
Downstream 100 bases:
>100_bases GCCCGGGACCACGTCCAGCCCAGGTCGGCACCGAAGCGATCTTGCACCAGGGGCGCCTCCGATCTAGAGGCGGATTACCG GGGCCGCGCAACCTCCCGGT
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NADPH-Dependent FMN Reductase; Arsenical Resistance Protein; Arsenic Resistance Protein; Arsenate Resistance ArsH; Flavoprotein; ArsH Protein; Arsenical Resistance Protein ArsH-Like Protein; NADPH-Dependent FMN Reductase Putative ArsH Protein; Ars H Protein; Arsenic Resistance ArsH-Like Protein; Arsenical Resistance Protein Arsh; NADH Oxidoreductase; Arsinic Resistance Protein ArsH; Arsenic Resistance Protein Fragment; Arylsulfatase-Family Protein; NADPH-Dependent FMN Reductase ArsH; NADPH-Dependent FMN Reductase ArsH Like; Arsenic Resistance Protein ArsH; Arsenical Resistance
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MASPTFSRLRALADPTHLPALSAEYIRSQPALGLGPLDPAPRILLLYGSLRERSYSRLVVEETARLLQLFGCETRIFDPS DLPLPDLIADDDHPAVEELRQHSLWSEGQVWCSPERHGQITGIMKAQVDHLPLAYKGLRPTQGRTLAVMQVSAGSQSFNS VNTLRILGRWMRMITIPNQSSVAKAYAEFDEAGRMLPSSYYDRIVDVAEELVCFTVLTRGHATQLVDRYSERKDRAEPVV TPARLAGLPGA
Sequences:
>Translated_251_residues MASPTFSRLRALADPTHLPALSAEYIRSQPALGLGPLDPAPRILLLYGSLRERSYSRLVVEETARLLQLFGCETRIFDPS DLPLPDLIADDDHPAVEELRQHSLWSEGQVWCSPERHGQITGIMKAQVDHLPLAYKGLRPTQGRTLAVMQVSAGSQSFNS VNTLRILGRWMRMITIPNQSSVAKAYAEFDEAGRMLPSSYYDRIVDVAEELVCFTVLTRGHATQLVDRYSERKDRAEPVV TPARLAGLPGA >Mature_250_residues ASPTFSRLRALADPTHLPALSAEYIRSQPALGLGPLDPAPRILLLYGSLRERSYSRLVVEETARLLQLFGCETRIFDPSD LPLPDLIADDDHPAVEELRQHSLWSEGQVWCSPERHGQITGIMKAQVDHLPLAYKGLRPTQGRTLAVMQVSAGSQSFNSV NTLRILGRWMRMITIPNQSSVAKAYAEFDEAGRMLPSSYYDRIVDVAEELVCFTVLTRGHATQLVDRYSERKDRAEPVVT PARLAGLPGA
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27891; Mature: 27760
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPTFSRLRALADPTHLPALSAEYIRSQPALGLGPLDPAPRILLLYGSLRERSYSRLVV CCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH EETARLLQLFGCETRIFDPSDLPLPDLIADDDHPAVEELRQHSLWSEGQVWCSPERHGQI HHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCE TGIMKAQVDHLPLAYKGLRPTQGRTLAVMQVSAGSQSFNSVNTLRILGRWMRMITIPNQS EHHHHHHHHCCCHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH SVAKAYAEFDEAGRMLPSSYYDRIVDVAEELVCFTVLTRGHATQLVDRYSERKDRAEPVV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC TPARLAGLPGA CHHHHCCCCCC >Mature Secondary Structure ASPTFSRLRALADPTHLPALSAEYIRSQPALGLGPLDPAPRILLLYGSLRERSYSRLVV CCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH EETARLLQLFGCETRIFDPSDLPLPDLIADDDHPAVEELRQHSLWSEGQVWCSPERHGQI HHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCE TGIMKAQVDHLPLAYKGLRPTQGRTLAVMQVSAGSQSFNSVNTLRILGRWMRMITIPNQS EHHHHHHHHCCCHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH SVAKAYAEFDEAGRMLPSSYYDRIVDVAEELVCFTVLTRGHATQLVDRYSERKDRAEPVV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC TPARLAGLPGA CHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA