| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487856
Identifier: 103487856
GI number: 103487856
Start: 2497764
End: 2498111
Strand: Reverse
Name: 103487856
Synonym: Sala_2375
Alternate gene names: NA
Gene position: 2498111-2497764 (Counterclockwise)
Preceding gene: 103487857
Following gene: 103487855
Centisome position: 74.68
GC content: 65.8
Gene sequence:
>348_bases ATGGCGCACCGCTATACGAGCTTCGGGGATTTCTGGCCCTTTTACCTGCGCGAGCATAGCAAGGCGTCGACACGCGCATT GCACTATGTCGGGACCAGCCTCGTCGTCATGATTGCGGTCGGCGCGGCGCTGACGGGGCGGTGGGAATGGCTGATCGCGC TGCCGGTCGCGGGTTATGCCTTTGCGTGGGTCGCGCATTTCGCGGTCGAGAAGAACCGACCCGCGACCTTCACCTATCCG CTGTGGAGCCTCGCCGCCGATTTCCGGATGTGGGCGTTGTGGCTGAGCGGGCGTCTGGATCCCGAACTCGACCGCGCGGG GGTCGTGCGGCACGACCACCCGGAGTGA
Upstream 100 bases:
>100_bases GCCGATCGCGCGCGATTCCTGCAAGCGCTCGACGCCGCGCTGGTACGGGTCAAGCGGGGGTTGGCTTGACCGCGCGGCGC AGGCGCGACATGTTTGCGCG
Downstream 100 bases:
>100_bases GCGATCGTGTCTGGCGCAAATGATAGGTAACGCAATGGCATCGCCCGCCGCAGATGCACCATTGCCGCCCGATTGATCAA GGAGACATTGCCATGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAHRYTSFGDFWPFYLREHSKASTRALHYVGTSLVVMIAVGAALTGRWEWLIALPVAGYAFAWVAHFAVEKNRPATFTYP LWSLAADFRMWALWLSGRLDPELDRAGVVRHDHPE
Sequences:
>Translated_115_residues MAHRYTSFGDFWPFYLREHSKASTRALHYVGTSLVVMIAVGAALTGRWEWLIALPVAGYAFAWVAHFAVEKNRPATFTYP LWSLAADFRMWALWLSGRLDPELDRAGVVRHDHPE >Mature_114_residues AHRYTSFGDFWPFYLREHSKASTRALHYVGTSLVVMIAVGAALTGRWEWLIALPVAGYAFAWVAHFAVEKNRPATFTYPL WSLAADFRMWALWLSGRLDPELDRAGVVRHDHPE
Specific function: Unknown
COG id: COG4323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13177; Mature: 13046
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRYTSFGDFWPFYLREHSKASTRALHYVGTSLVVMIAVGAALTGRWEWLIALPVAGYA CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH FAWVAHFAVEKNRPATFTYPLWSLAADFRMWALWLSGRLDPELDRAGVVRHDHPE HHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHRYTSFGDFWPFYLREHSKASTRALHYVGTSLVVMIAVGAALTGRWEWLIALPVAGYA CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH FAWVAHFAVEKNRPATFTYPLWSLAADFRMWALWLSGRLDPELDRAGVVRHDHPE HHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA