Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487852

Identifier: 103487852

GI number: 103487852

Start: 2494676

End: 2495110

Strand: Direct

Name: 103487852

Synonym: Sala_2371

Alternate gene names: NA

Gene position: 2494676-2495110 (Clockwise)

Preceding gene: 103487851

Following gene: 103487861

Centisome position: 74.58

GC content: 70.34

Gene sequence:

>435_bases
ATGCCAACCCTGCTCCGCATCCTCACCCTCGCCGCATCGCTCGCGTTCGCCCCCGCCGCCGCCAGCGCCGCGCCGCCGCC
GCCCGCGGCCCGGCCCGCGCCGCTGCAACAGCTGCGCATCCATGAAATCCCGCGCGCCAACGAGGGCGTGTTCCACGACC
GTTTCCGCGATCATGCGCTGCGCATCATGGCGCGGCACGGCTTTGCGGTGCGCTCGATCTGGCGCAGCGAACATGCGGAC
AAGGTCGAGTTCGTCTATCTGCTCGACTGGCCCGACGCCGCGACGATGAAAGCGGCGTGGGCGGCCTTCATGGCCGACGA
GGAATGGGCCGCGATCAAGCGCGAAACGGGGGCGCGCCACGGCCGCTTCGTCGATGCGATATCGGACCGCACGCTCGAAC
CCCTGCCCTGGTCGCCGGGTCGCGCAATCGAATAG

Upstream 100 bases:

>100_bases
ATGAGTCAGGTCTATGAGGACACGGGGCGCGAGCTGTATATGGGCGCTGGTGGGCGCGAGCATGATTGACGCCCATCGGG
CGGAGAAAGGATGACAGCCC

Downstream 100 bases:

>100_bases
CGCAGGCGCCGCACCGCTGCCGATGCGTCAGTCGGGGGCGGCGCGGGGATCGGAGGTGGCCAGTCGGCCCTTTTCGACCC
AGGCGGCGAGTCCGGGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPTLLRILTLAASLAFAPAAASAAPPPPAARPAPLQQLRIHEIPRANEGVFHDRFRDHALRIMARHGFAVRSIWRSEHAD
KVEFVYLLDWPDAATMKAAWAAFMADEEWAAIKRETGARHGRFVDAISDRTLEPLPWSPGRAIE

Sequences:

>Translated_144_residues
MPTLLRILTLAASLAFAPAAASAAPPPPAARPAPLQQLRIHEIPRANEGVFHDRFRDHALRIMARHGFAVRSIWRSEHAD
KVEFVYLLDWPDAATMKAAWAAFMADEEWAAIKRETGARHGRFVDAISDRTLEPLPWSPGRAIE
>Mature_143_residues
PTLLRILTLAASLAFAPAAASAAPPPPAARPAPLQQLRIHEIPRANEGVFHDRFRDHALRIMARHGFAVRSIWRSEHADK
VEFVYLLDWPDAATMKAAWAAFMADEEWAAIKRETGARHGRFVDAISDRTLEPLPWSPGRAIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16067; Mature: 15935

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLRILTLAASLAFAPAAASAAPPPPAARPAPLQQLRIHEIPRANEGVFHDRFRDHAL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHH
RIMARHGFAVRSIWRSEHADKVEFVYLLDWPDAATMKAAWAAFMADEEWAAIKRETGARH
HHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC
GRFVDAISDRTLEPLPWSPGRAIE
CCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTLLRILTLAASLAFAPAAASAAPPPPAARPAPLQQLRIHEIPRANEGVFHDRFRDHAL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHH
RIMARHGFAVRSIWRSEHADKVEFVYLLDWPDAATMKAAWAAFMADEEWAAIKRETGARH
HHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC
GRFVDAISDRTLEPLPWSPGRAIE
CCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA