| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is hisE
Identifier: 103487861
GI number: 103487861
Start: 2503512
End: 2503841
Strand: Direct
Name: hisE
Synonym: Sala_2380
Alternate gene names: 103487861
Gene position: 2503512-2503841 (Clockwise)
Preceding gene: 103487852
Following gene: 103487862
Centisome position: 74.84
GC content: 69.09
Gene sequence:
>330_bases ATGAGCAAGGCAATGGGCGAAACGCTGGGACGGCTCGAGGCGGTCATCCACGACCGGCTCGCCGCGGGCGAAGCCGAAGC CTCCTATGTCGCGAGTCTCGCCGCCAAGGGCCGCGGCAAGATCGCGCAGAAGCTGGGCGAAGAAGCCGTCGAGGCGGTGA TCGCCGCGGTGAGCGAAGACGATCCCGCGCTGATCGGCGAGGCGAGCGATCTCGTCTTTCACCTCTCGATCCTGCTCGCG GAGCGCGGCCTGACGTGGGACGCGATCGCCGCCGAACTCGACCGCCGCCACGGCACTTCGGGCCACACCGAAAAAGCCGC CCGCGCGTGA
Upstream 100 bases:
>100_bases CCGAGGCGTTTCAATATGGTTGACGCGGCGGTAAGTTTTTCAGCGGCGCTTGCCCGCGCGGCGCGGCGGCGGTAGGCACG GCGCCGAAAGGATCGGCGCG
Downstream 100 bases:
>100_bases AAGTCCGTCCAGCCCGTTTCTTCACCACATCCGTCATCCCGGCGAAGGCCGGGATCTCGCCGGTGCGTCAATCCGATTGG GTGAGATCCCGGCCTTCGCC
Product: phosphoribosyl-ATP pyrophosphohydrolase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSKAMGETLGRLEAVIHDRLAAGEAEASYVASLAAKGRGKIAQKLGEEAVEAVIAAVSEDDPALIGEASDLVFHLSILLA ERGLTWDAIAAELDRRHGTSGHTEKAARA
Sequences:
>Translated_109_residues MSKAMGETLGRLEAVIHDRLAAGEAEASYVASLAAKGRGKIAQKLGEEAVEAVIAAVSEDDPALIGEASDLVFHLSILLA ERGLTWDAIAAELDRRHGTSGHTEKAARA >Mature_108_residues SKAMGETLGRLEAVIHDRLAAGEAEASYVASLAAKGRGKIAQKLGEEAVEAVIAAVSEDDPALIGEASDLVFHLSILLAE RGLTWDAIAAELDRRHGTSGHTEKAARA
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=102, Percent_Identity=41.1764705882353, Blast_Score=71, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_SPHAL (Q1GQI3)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617422.1 - ProteinModelPortal: Q1GQI3 - SMR: Q1GQI3 - GeneID: 4080820 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2380 - NMPDR: fig|317655.9.peg.2303 - HOGENOM: HBG646527 - OMA: ETVMAAK - BioCyc: SALA317655:SALA_2380-MONOMER - BRENDA: 3.6.1.31 - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 11376; Mature: 11245
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAMGETLGRLEAVIHDRLAAGEAEASYVASLAAKGRGKIAQKLGEEAVEAVIAAVSED CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DPALIGEASDLVFHLSILLAERGLTWDAIAAELDRRHGTSGHTEKAARA CCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure SKAMGETLGRLEAVIHDRLAAGEAEASYVASLAAKGRGKIAQKLGEEAVEAVIAAVSED CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC DPALIGEASDLVFHLSILLAERGLTWDAIAAELDRRHGTSGHTEKAARA CCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA