Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487826

Identifier: 103487826

GI number: 103487826

Start: 2472068

End: 2472526

Strand: Reverse

Name: 103487826

Synonym: Sala_2345

Alternate gene names: NA

Gene position: 2472526-2472068 (Counterclockwise)

Preceding gene: 103487827

Following gene: 103487824

Centisome position: 73.91

GC content: 65.36

Gene sequence:

>459_bases
ATGACAGCGAACCACGCCGCCCCCGCCTTCGCCGCGATCATGTTGCTCACCGGGGTCGGCATCCCGATCCTCGCGGCGCT
GAACGGGGGGCTTGGCGCGCGGCTTGGCAGCCCGATGGCGGCGTCGATGATCCTCTTCGGTCTCGCCTTCCTCATCGCTG
CGGCGGGCGCGCTGATGACCGGCTCGTTCGGCGCGGTGCGCTTCACGGGCGACATCCCCGTACATTTCTATTTCGGTGGG
CTGTTCGTTGCCTTTTATGTGATCGCCGTGACCTTCATCGCGCCGCGCTTCGGTGTCGGCAATGCGATCTTTTTCGTGCT
CGTCGGCCAACTCGTCAGCGCGGCGACGATCGACCATTTTGGCCTGTTCGGCGCGATACGCTCGACGATCGACCTGAAAC
GGATCGCCGGGATTGCGCTGATGATTGCAGGCGTCTGGCTCGCGCGGCGCACGGGGTGA

Upstream 100 bases:

>100_bases
CCGTCGTCAATATCGACGAGGTCGATCTGGACAATTGGGGGGTGGGCGGCCTGCCCGTCGCCGCATATCGTGCGCGGCAA
AAATCGAAGGAGCCCGAAAC

Downstream 100 bases:

>100_bases
GGGCGCCAGCGTCGGGCCAGCCGCGGTGCGCGGCGATGCATCCTGAAAAAAGGGCGGCCCCGGGGCCGCCCTTTTCGTGT
CCGGTCGTGCCGCCGATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTANHAAPAFAAIMLLTGVGIPILAALNGGLGARLGSPMAASMILFGLAFLIAAAGALMTGSFGAVRFTGDIPVHFYFGG
LFVAFYVIAVTFIAPRFGVGNAIFFVLVGQLVSAATIDHFGLFGAIRSTIDLKRIAGIALMIAGVWLARRTG

Sequences:

>Translated_152_residues
MTANHAAPAFAAIMLLTGVGIPILAALNGGLGARLGSPMAASMILFGLAFLIAAAGALMTGSFGAVRFTGDIPVHFYFGG
LFVAFYVIAVTFIAPRFGVGNAIFFVLVGQLVSAATIDHFGLFGAIRSTIDLKRIAGIALMIAGVWLARRTG
>Mature_151_residues
TANHAAPAFAAIMLLTGVGIPILAALNGGLGARLGSPMAASMILFGLAFLIAAAGALMTGSFGAVRFTGDIPVHFYFGGL
FVAFYVIAVTFIAPRFGVGNAIFFVLVGQLVSAATIDHFGLFGAIRSTIDLKRIAGIALMIAGVWLARRTG

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15604; Mature: 15473

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANHAAPAFAAIMLLTGVGIPILAALNGGLGARLGSPMAASMILFGLAFLIAAAGALMT
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GSFGAVRFTGDIPVHFYFGGLFVAFYVIAVTFIAPRFGVGNAIFFVLVGQLVSAATIDHF
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GLFGAIRSTIDLKRIAGIALMIAGVWLARRTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TANHAAPAFAAIMLLTGVGIPILAALNGGLGARLGSPMAASMILFGLAFLIAAAGALMT
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GSFGAVRFTGDIPVHFYFGGLFVAFYVIAVTFIAPRFGVGNAIFFVLVGQLVSAATIDHF
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GLFGAIRSTIDLKRIAGIALMIAGVWLARRTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA