| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487818
Identifier: 103487818
GI number: 103487818
Start: 2465481
End: 2465984
Strand: Reverse
Name: 103487818
Synonym: Sala_2337
Alternate gene names: NA
Gene position: 2465984-2465481 (Counterclockwise)
Preceding gene: 103487819
Following gene: 103487817
Centisome position: 73.72
GC content: 73.21
Gene sequence:
>504_bases GTGACCGGGGGGCTTGGCGTGCTGGTGCTCTGCACCGGCAATTCGGCGCGCAGCATCTTGGGCGAGGCGCTGGTCGGGCG CATGGGCGAAGGGCGGCTCACTGCGTTCAGCGCGGGGAGCAAGCCGAGGGGTGCACCGCACCCCGCGGCGCTCCGCCTGC TCCGCGCAAAGGGTTTTGACGTGGCAGCGTTCCGCTCGAAAAGCTGGGACGAATTCGCCGCGCCGGGCGCGCCCCGCATC GACATCGCGATCACCGTGTGCGGCAATGCGGCGGGCGAGGCGTGCCCGCTGTTCACCGGCGCGCCGGTGCGCGCGCATTG GGGGCTTGCCGACCCCGCCGATGCGCCGGGCGGCGCGGCGGCCGAGGATGCGGCCTTCGCCGAAACCTGGCGGCTGCTCG AAATGCGCGTCGCGGCGATGCTCGCGCTGCCGCTCGAAACCATGACGGCGGCCGAGCGGCGCGCCACGCTGAACGCAATC GGACAGATGGAGGGCGCGGCGTGA
Upstream 100 bases:
>100_bases GCGCCGCTGGCGTCGGCCGACGCTGCCGAAGGCGCGTGTTGCGTGCCTGCGACAGTCGAGGTGCGCCCGGCGTCCGCGCC GAACGTCTGTTGCTGACGCC
Downstream 100 bases:
>100_bases CCCGGCAGATCGCGGCCGAAGCGATCGGCAGCTTTTTCCTGTTCGCGGCGGTCGTTGGATCGGGAATCATGGCGGAGACG CTGTCGGGCGGCAATGTCGG
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Protein Tyrosine Phosphatase; Protein-Tyrosine Phosphatase Low Molecular Weight; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transcriptional Regulator ArsR Family; Protein-Tyrosine-Phosphatase; ArsR Family Transcriptional Regulator; Transcriptional Regulator/Arsenate Reductase; Transcriptional Regulator; Arsenate Reductase ArsC; Phosphatase; Protein-Tyrosine-Phosphatase Protein; Arsenate Reductase Subunit ArsC; Arsenate Reductase / Phosphotyrosine Protein Phosphatase; ArsR Family Transcriptional Regulator Tyrosine Phosphatase; Arsenate Reductase Gene ARSC; Protein ArsC; Protein-Tyrosine Phosphatase
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTGGLGVLVLCTGNSARSILGEALVGRMGEGRLTAFSAGSKPRGAPHPAALRLLRAKGFDVAAFRSKSWDEFAAPGAPRI DIAITVCGNAAGEACPLFTGAPVRAHWGLADPADAPGGAAAEDAAFAETWRLLEMRVAAMLALPLETMTAAERRATLNAI GQMEGAA
Sequences:
>Translated_167_residues MTGGLGVLVLCTGNSARSILGEALVGRMGEGRLTAFSAGSKPRGAPHPAALRLLRAKGFDVAAFRSKSWDEFAAPGAPRI DIAITVCGNAAGEACPLFTGAPVRAHWGLADPADAPGGAAAEDAAFAETWRLLEMRVAAMLALPLETMTAAERRATLNAI GQMEGAA >Mature_166_residues TGGLGVLVLCTGNSARSILGEALVGRMGEGRLTAFSAGSKPRGAPHPAALRLLRAKGFDVAAFRSKSWDEFAAPGAPRID IAITVCGNAAGEACPLFTGAPVRAHWGLADPADAPGGAAAEDAAFAETWRLLEMRVAAMLALPLETMTAAERRATLNAIG QMEGAA
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17056; Mature: 16925
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGLGVLVLCTGNSARSILGEALVGRMGEGRLTAFSAGSKPRGAPHPAALRLLRAKGFD CCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC VAAFRSKSWDEFAAPGAPRIDIAITVCGNAAGEACPLFTGAPVRAHWGLADPADAPGGAA EEECCCCCCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC AEDAAFAETWRLLEMRVAAMLALPLETMTAAERRATLNAIGQMEGAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TGGLGVLVLCTGNSARSILGEALVGRMGEGRLTAFSAGSKPRGAPHPAALRLLRAKGFD CCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC VAAFRSKSWDEFAAPGAPRIDIAITVCGNAAGEACPLFTGAPVRAHWGLADPADAPGGAA EEECCCCCCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC AEDAAFAETWRLLEMRVAAMLALPLETMTAAERRATLNAIGQMEGAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA