| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is aqpZ [C]
Identifier: 103487817
GI number: 103487817
Start: 2464825
End: 2465484
Strand: Reverse
Name: aqpZ [C]
Synonym: Sala_2336
Alternate gene names: 103487817
Gene position: 2465484-2464825 (Counterclockwise)
Preceding gene: 103487818
Following gene: 103487816
Centisome position: 73.7
GC content: 67.88
Gene sequence:
>660_bases GTGACCCGGCAGATCGCGGCCGAAGCGATCGGCAGCTTTTTCCTGTTCGCGGCGGTCGTTGGATCGGGAATCATGGCGGA GACGCTGTCGGGCGGCAATGTCGGGATTGCGCTGCTCGCCAATGCGCTCGCGACCGGCGCGATATTATTCGTGCTGATCG CGATGCTGGGGCCGGTGTCGGGGGCGCATTTCAACCCGGCGGTGACGCTGGTGATGGCGCTCGGCCGCCGCATTGCACCG CGCGCCGCGGCCCTTTACGTCGCCGCGCAGCTTGCGGGCGGTATTCTTGGCGTGTGGGCGGCGCATCTGATGTTCGACTT GCCGCTGCTGCAATTCTCGGAGAAGGCGCGCACGGGCAGCGGGCAGTGGGCGGGCGAGTTCGTCGCGACCTTTGGCCTGA TTCTGACGATCCTCGGCACCGTGCGCCACCGCCCCGATTGGGTCGCACCCAGCGTCGCGCTCTATATCACCGCCGCCTAT TGGTTCACCTCGTCGACGAGTTTCGCCAATCCCGCCATTGCCGTCGCGCGCAGCCTGTCGGACAGTTTCGCCGGCATCGC ACCCGCCGACGTGCCCGCCTTTGTGACGGCGCAGCTCGGCGGCGCGGTGGCGGCCTGGATGTACGGGCGCTGGTTGTTTG CCGGGGAGGCGGCGGCATAA
Upstream 100 bases:
>100_bases AAATGCGCGTCGCGGCGATGCTCGCGCTGCCGCTCGAAACCATGACGGCGGCCGAGCGGCGCGCCACGCTGAACGCAATC GGACAGATGGAGGGCGCGGC
Downstream 100 bases:
>100_bases CCCCTACCGTCGCATGGCCGCGCTTGCTAGGGCGGGGTCATGTCCTCTCCCGCCGACGCGCTCCTCCCGCTGCTCAAATC CACCTTCGGCTTCGACGCCT
Product: major intrinsic protein
Products: H2O [Cytoplasm] [C]
Alternate protein names: Phosphotyrosine Protein Phosphatase; MIP Family Protein; MIP Family Channel Protein; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transport Transmembrane Protein; Glycerol Uptake Transporter Protein MIP Family; Aquaglyceroporin Intrinsic Protein Family; MIP Family Permease; Mip Family Channel Protein; Channel Transporter; Transmembrane Aquaporin; Arsenate Reductase; Glycerol Uptake Facilitator Or Related Permease; Transmembrane ABC Transporter Protein; Transmembrane Abc Transporter Protein Intrinsic Protein; Integral Membrane Protein; Transmembrane ABC Transporter Protein Intrinsic Protein; Aquaporin/Glycerol Uptake Facilitator Protein
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTRQIAAEAIGSFFLFAAVVGSGIMAETLSGGNVGIALLANALATGAILFVLIAMLGPVSGAHFNPAVTLVMALGRRIAP RAAALYVAAQLAGGILGVWAAHLMFDLPLLQFSEKARTGSGQWAGEFVATFGLILTILGTVRHRPDWVAPSVALYITAAY WFTSSTSFANPAIAVARSLSDSFAGIAPADVPAFVTAQLGGAVAAWMYGRWLFAGEAAA
Sequences:
>Translated_219_residues MTRQIAAEAIGSFFLFAAVVGSGIMAETLSGGNVGIALLANALATGAILFVLIAMLGPVSGAHFNPAVTLVMALGRRIAP RAAALYVAAQLAGGILGVWAAHLMFDLPLLQFSEKARTGSGQWAGEFVATFGLILTILGTVRHRPDWVAPSVALYITAAY WFTSSTSFANPAIAVARSLSDSFAGIAPADVPAFVTAQLGGAVAAWMYGRWLFAGEAAA >Mature_218_residues TRQIAAEAIGSFFLFAAVVGSGIMAETLSGGNVGIALLANALATGAILFVLIAMLGPVSGAHFNPAVTLVMALGRRIAPR AAALYVAAQLAGGILGVWAAHLMFDLPLLQFSEKARTGSGQWAGEFVATFGLILTILGTVRHRPDWVAPSVALYITAAYW FTSSTSFANPAIAVARSLSDSFAGIAPADVPAFVTAQLGGAVAAWMYGRWLFAGEAAA
Specific function: Channel That Permits Osmotically Driven Movement Of Water In Both Directions. It Is Involved In The Osmoregulation And In The Maintenance Of Cell Turgor During Volume Expansion In Rapidly Growing Cells. It Mediates Rapid Entry Or Exit Of Water In Response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22528; Mature: 22397
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQIAAEAIGSFFLFAAVVGSGIMAETLSGGNVGIALLANALATGAILFVLIAMLGPVS CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GAHFNPAVTLVMALGRRIAPRAAALYVAAQLAGGILGVWAAHLMFDLPLLQFSEKARTGS CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQWAGEFVATFGLILTILGTVRHRPDWVAPSVALYITAAYWFTSSTSFANPAIAVARSLS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DSFAGIAPADVPAFVTAQLGGAVAAWMYGRWLFAGEAAA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRQIAAEAIGSFFLFAAVVGSGIMAETLSGGNVGIALLANALATGAILFVLIAMLGPVS CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GAHFNPAVTLVMALGRRIAPRAAALYVAAQLAGGILGVWAAHLMFDLPLLQFSEKARTGS CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQWAGEFVATFGLILTILGTVRHRPDWVAPSVALYITAAYWFTSSTSFANPAIAVARSLS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DSFAGIAPADVPAFVTAQLGGAVAAWMYGRWLFAGEAAA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA