Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487787

Identifier: 103487787

GI number: 103487787

Start: 2433611

End: 2434423

Strand: Reverse

Name: 103487787

Synonym: Sala_2306

Alternate gene names: NA

Gene position: 2434423-2433611 (Counterclockwise)

Preceding gene: 103487793

Following gene: 103487786

Centisome position: 72.77

GC content: 67.53

Gene sequence:

>813_bases
ATGCCCCGGAACCCGGCAGATATTTGCCCGAAAGGGATAAAGGCCAAACAGGTTCAGAGTGAGGTCGAAGGAAACGTCCG
CTTGGGGTCGCAACCGGCCGCGCATACGCGAATCTTTCCCACCCGCCCGCTCCGACGCTACAGGAAACCGATGGCCCATA
TCCTGATTCTCGCCGCACTTCCCGAAGAGGCCAACGCATTGTTTCCGGACGTCGGCGAACGCAGCGACGATCCCTTCGCC
GTCCGTCGCATCGCCGCGGATGGCCATGAGGTCGCCATCGCCACCTGCGGGCTCGGCAAGGTCAACGCCGCGCTGGTGGT
AGGCGTGCTCGGCGGCGACGCTGACCTCATTATGATGACGGGCACTTGCGGATCGCTCGGCGCGCCGCCGGGCGCCTATT
GGATCGCCGAGGCGTTGCAGCATGATTATGGCGCGACCGAGCCCGGCCGCTTCCGTCGCTATCGTGCGGGCGACTGGCCG
ATAGGCGAGCCGGGGCGGGGATCGTCGGGCGCGCATTTCGCGGCGATGGCGGATCCGGGGCTCGACCTGCCGCACGCGCG
CATCGCCAGCGGCGACAGTTTCATCGCCTGTCCCGATGCCGCCGCCGATCTCACGTCGCTCGGCGCAACGCTCGTCGACA
TGGAGGTCGGCGCGGTGGCGCAGGCGGCGATGCGGCTCGGCAAGCCATGGGCGGCGATCAAGGCGGTGACCGACGAGGCG
AATTGTGACAGCGGGGGCGCATTCCAGACGAACCTGCGCCATGCTGCCCGCGCCGCGGGGCAGGAAGTCGAGCGGTTGAT
CGCGATGCTTTGA

Upstream 100 bases:

>100_bases
CCTGAAACCAGTTGGCGCTTATCCCTTTGGGACAGGGGAGGGCCGGACCCCGGCCAAGGCCGGGGTTCATGGGCGTCCAA
AAGTCAGGTGCTGCTCTACG

Downstream 100 bases:

>100_bases
TCCGTTTCGCATCGGTCGCTTCTGTGGTAGACTGAGCCGTCTCCGCACCGAGGAGCGACACGCCATGCGCTACTACCGGT
CATCCTTGCTTCTGCTCGCC

Product: purine phosphorylases family protein 1

Products: 5-methylthio-D-ribose; adenine

Alternate protein names: Purine Phosphorylases Family

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPRNPADICPKGIKAKQVQSEVEGNVRLGSQPAAHTRIFPTRPLRRYRKPMAHILILAALPEEANALFPDVGERSDDPFA
VRRIAADGHEVAIATCGLGKVNAALVVGVLGGDADLIMMTGTCGSLGAPPGAYWIAEALQHDYGATEPGRFRRYRAGDWP
IGEPGRGSSGAHFAAMADPGLDLPHARIASGDSFIACPDAAADLTSLGATLVDMEVGAVAQAAMRLGKPWAAIKAVTDEA
NCDSGGAFQTNLRHAARAAGQEVERLIAML

Sequences:

>Translated_270_residues
MPRNPADICPKGIKAKQVQSEVEGNVRLGSQPAAHTRIFPTRPLRRYRKPMAHILILAALPEEANALFPDVGERSDDPFA
VRRIAADGHEVAIATCGLGKVNAALVVGVLGGDADLIMMTGTCGSLGAPPGAYWIAEALQHDYGATEPGRFRRYRAGDWP
IGEPGRGSSGAHFAAMADPGLDLPHARIASGDSFIACPDAAADLTSLGATLVDMEVGAVAQAAMRLGKPWAAIKAVTDEA
NCDSGGAFQTNLRHAARAAGQEVERLIAML
>Mature_269_residues
PRNPADICPKGIKAKQVQSEVEGNVRLGSQPAAHTRIFPTRPLRRYRKPMAHILILAALPEEANALFPDVGERSDDPFAV
RRIAADGHEVAIATCGLGKVNAALVVGVLGGDADLIMMTGTCGSLGAPPGAYWIAEALQHDYGATEPGRFRRYRAGDWPI
GEPGRGSSGAHFAAMADPGLDLPHARIASGDSFIACPDAAADLTSLGATLVDMEVGAVAQAAMRLGKPWAAIKAVTDEAN
CDSGGAFQTNLRHAARAAGQEVERLIAML

Specific function: Unknown

COG id: COG0775

COG function: function code F; Nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.2.16; 3.2.2.9

Molecular weight: Translated: 28264; Mature: 28132

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRNPADICPKGIKAKQVQSEVEGNVRLGSQPAAHTRIFPTRPLRRYRKPMAHILILAAL
CCCCCHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHEEHEEEC
PEEANALFPDVGERSDDPFAVRRIAADGHEVAIATCGLGKVNAALVVGVLGGDADLIMMT
CCHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEE
GTCGSLGAPPGAYWIAEALQHDYGATEPGRFRRYRAGDWPIGEPGRGSSGAHFAAMADPG
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
LDLPHARIASGDSFIACPDAAADLTSLGATLVDMEVGAVAQAAMRLGKPWAAIKAVTDEA
CCCCCHHHCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHEEECCCC
NCDSGGAFQTNLRHAARAAGQEVERLIAML
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRNPADICPKGIKAKQVQSEVEGNVRLGSQPAAHTRIFPTRPLRRYRKPMAHILILAAL
CCCCHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHEEHEEEC
PEEANALFPDVGERSDDPFAVRRIAADGHEVAIATCGLGKVNAALVVGVLGGDADLIMMT
CCHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEE
GTCGSLGAPPGAYWIAEALQHDYGATEPGRFRRYRAGDWPIGEPGRGSSGAHFAAMADPG
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
LDLPHARIASGDSFIACPDAAADLTSLGATLVDMEVGAVAQAAMRLGKPWAAIKAVTDEA
CCCCCHHHCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHEEECCCC
NCDSGGAFQTNLRHAARAAGQEVERLIAML
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: methylthioadenosine; H2O

Specific reaction: methylthioadenosine + H2O = 5-methylthio-D-ribose + adenine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA