Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487780

Identifier: 103487780

GI number: 103487780

Start: 2426043

End: 2427269

Strand: Direct

Name: 103487780

Synonym: Sala_2299

Alternate gene names: NA

Gene position: 2426043-2427269 (Clockwise)

Preceding gene: 103487778

Following gene: 103487781

Centisome position: 72.52

GC content: 71.8

Gene sequence:

>1227_bases
TTGCGCGACGTTCCCCCGCCGACGCGCCGGTCAGGTCGGCGCCGCCTTCGCCTTGCGCGCCTGCCGCCACGAGCGCCGCT
TCTTCACCATCGCCACCCCGTCGTCCGCGCCCCCCGGCGACGCCGTCAGCGGCACCGCCGGCACCGGCCGCCCCTCGGCC
TCCGCGGCCGCGATCCATTCGCGATACACTTCGGGAATATCGCCCCCCGCCGCCACCCAGCCCGCCTCGCCGCCAAAGCG
TTGCACCGGATCGGCGTCGGGCCGATCCTCGCCGATCTGCAACGGCCCGTGATAGGGCGAGGCAAGCGCGTCCAGCCGCA
CCAGCGGCACCGCGGGGTCGCCCAGCTGCGCCGCGATCGCGTCGGGGCCGCCCGCCGCGATCGCGGCATCGCTCGCACGC
TGCCGCGCGGCGAGCGCGAGCAGCGCCGCATCGATCTCCGCCCGCGCCTGTTCGTCGAGTTCCATCCCCTCGAACCCCTC
GATCAGCCCCGCCGCCGCATCCTGTGCCACGAGCGCGTCGCCATGCGTCCCGAGCGCCGTCGAGACGCCGCCATGGATCA
CCGTCCGCACCGTCGTGGTCGACGCCTCGGCCATCGCGCCCGCCGCCCCCGCGCCTCCCGCAGGTCCGCTCCCGTCGATC
CCCCCTTTCCCGCGCGCGTCGCTCTCCCTGTTCCCGTTCGTGTCGAGCGAAGTCGAGGCACCCCGCGCTTCGACGCGACC
CGCCGAGGCCGCCGCCCCCGCGCTCGCCCGCGTCGAGAAATAATTGATCGTCGTGCGCTTGCCCCCCGCATCCTGGCCGT
AATGGCGCAGGCAGAACATCAGCAGCGCGTCATTATGCTTGCGCCGGAATCCCATCAGCTTGCCCGCGACAAAGACGGGC
ACCAGATAGCCGTCGATCGCGCGCTCGAACGCAATATCCTTCAGCCGCGCGACCCCGAAATCGAGCGCCGCCTCCCACGC
CCGCCGAAAGCTCTCCGCGCCCGGCGCGCGGCGCAGCGTATAGCAATTCGTCTGCGCCATATTGACCATCGCCGCCGCGC
GGCTGACCGACCCCGTATCGGCGAGCGCGGCGATAAAGGCCTTCTGCCGCTCGGGCGTCCACCCGTCGTGCCGATATTTG
CGCGGCACCGGCGTAAAGTCGGGAAGCGGCGGCCGCGCCGCCTTCGCGATCGGGGTGCGATTCTGCATATCCTGTTCTCC
TGTCGGTCAAAACCGGACAGGATATGA

Upstream 100 bases:

>100_bases
GCGGCGTATCGGTCATGGGCAACTTTCCAGGAAAATGATGCGCGGCCCTAGCGGCACCTGACCGCCATCGTCAATCGCGA
AGGCGCGCGGACCGCACGGA

Downstream 100 bases:

>100_bases
CGGAGGGGAGGAATGTAGGAAAGGGTTTTGTTTATGGTTTGTTCTGGAATGAGGGTGGATGGCGTTACGCCCCATCAAAG
CCGTAGCTGGCCGCAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MRDVPPPTRRSGRRRLRLARLPPRAPLLHHRHPVVRAPRRRRQRHRRHRPPLGLRGRDPFAIHFGNIAPRRHPARLAAKA
LHRIGVGPILADLQRPVIGRGKRVQPHQRHRGVAQLRRDRVGAARRDRGIARTLPRGEREQRRIDLRPRLFVEFHPLEPL
DQPRRRILCHERVAMRPERRRDAAMDHRPHRRGRRLGHRARRPRASRRSAPVDPPFPARVALPVPVRVERSRGTPRFDAT
RRGRRPRARPRREIIDRRALAPRILAVMAQAEHQQRVIMLAPESHQLARDKDGHQIAVDRALERNILQPRDPEIERRLPR
PPKALRARRAAQRIAIRLRHIDHRRRAADRPRIGERGDKGLLPLGRPPVVPIFARHRRKVGKRRPRRLRDRGAILHILFS
CRSKPDRI

Sequences:

>Translated_408_residues
MRDVPPPTRRSGRRRLRLARLPPRAPLLHHRHPVVRAPRRRRQRHRRHRPPLGLRGRDPFAIHFGNIAPRRHPARLAAKA
LHRIGVGPILADLQRPVIGRGKRVQPHQRHRGVAQLRRDRVGAARRDRGIARTLPRGEREQRRIDLRPRLFVEFHPLEPL
DQPRRRILCHERVAMRPERRRDAAMDHRPHRRGRRLGHRARRPRASRRSAPVDPPFPARVALPVPVRVERSRGTPRFDAT
RRGRRPRARPRREIIDRRALAPRILAVMAQAEHQQRVIMLAPESHQLARDKDGHQIAVDRALERNILQPRDPEIERRLPR
PPKALRARRAAQRIAIRLRHIDHRRRAADRPRIGERGDKGLLPLGRPPVVPIFARHRRKVGKRRPRRLRDRGAILHILFS
CRSKPDRI
>Mature_408_residues
MRDVPPPTRRSGRRRLRLARLPPRAPLLHHRHPVVRAPRRRRQRHRRHRPPLGLRGRDPFAIHFGNIAPRRHPARLAAKA
LHRIGVGPILADLQRPVIGRGKRVQPHQRHRGVAQLRRDRVGAARRDRGIARTLPRGEREQRRIDLRPRLFVEFHPLEPL
DQPRRRILCHERVAMRPERRRDAAMDHRPHRRGRRLGHRARRPRASRRSAPVDPPFPARVALPVPVRVERSRGTPRFDAT
RRGRRPRARPRREIIDRRALAPRILAVMAQAEHQQRVIMLAPESHQLARDKDGHQIAVDRALERNILQPRDPEIERRLPR
PPKALRARRAAQRIAIRLRHIDHRRRAADRPRIGERGDKGLLPLGRPPVVPIFARHRRKVGKRRPRRLRDRGAILHILFS
CRSKPDRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48049; Mature: 48049

Theoretical pI: Translated: 12.78; Mature: 12.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVPPPTRRSGRRRLRLARLPPRAPLLHHRHPVVRAPRRRRQRHRRHRPPLGLRGRDPF
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCE
AIHFGNIAPRRHPARLAAKALHRIGVGPILADLQRPVIGRGKRVQPHQRHRGVAQLRRDR
EEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VGAARRDRGIARTLPRGEREQRRIDLRPRLFVEFHPLEPLDQPRRRILCHERVAMRPERR
HCHHHHHCCHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHH
RDAAMDHRPHRRGRRLGHRARRPRASRRSAPVDPPFPARVALPVPVRVERSRGTPRFDAT
HHHHHCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCHH
RRGRRPRARPRREIIDRRALAPRILAVMAQAEHQQRVIMLAPESHQLARDKDGHQIAVDR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCCEEHHHH
ALERNILQPRDPEIERRLPRPPKALRARRAAQRIAIRLRHIDHRRRAADRPRIGERGDKG
HHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LLPLGRPPVVPIFARHRRKVGKRRPRRLRDRGAILHILFSCRSKPDRI
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRDVPPPTRRSGRRRLRLARLPPRAPLLHHRHPVVRAPRRRRQRHRRHRPPLGLRGRDPF
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCE
AIHFGNIAPRRHPARLAAKALHRIGVGPILADLQRPVIGRGKRVQPHQRHRGVAQLRRDR
EEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VGAARRDRGIARTLPRGEREQRRIDLRPRLFVEFHPLEPLDQPRRRILCHERVAMRPERR
HCHHHHHCCHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHH
RDAAMDHRPHRRGRRLGHRARRPRASRRSAPVDPPFPARVALPVPVRVERSRGTPRFDAT
HHHHHCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCHH
RRGRRPRARPRREIIDRRALAPRILAVMAQAEHQQRVIMLAPESHQLARDKDGHQIAVDR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCCEEHHHH
ALERNILQPRDPEIERRLPRPPKALRARRAAQRIAIRLRHIDHRRRAADRPRIGERGDKG
HHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LLPLGRPPVVPIFARHRRKVGKRRPRRLRDRGAILHILFSCRSKPDRI
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA