| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487748
Identifier: 103487748
GI number: 103487748
Start: 2385926
End: 2386522
Strand: Direct
Name: 103487748
Synonym: Sala_2267
Alternate gene names: NA
Gene position: 2385926-2386522 (Clockwise)
Preceding gene: 103487744
Following gene: 103487749
Centisome position: 71.32
GC content: 70.52
Gene sequence:
>597_bases ATGGCGTCGGGTATGACGAAACCCACGGGAGACGACGCACCCGCCAAAAAGGCGAAGACGAAGGGCGGCGCCAAAGTCGG CGCAAAACCCGCGAAGGCGCCCGCGCGCCGCTACGAGCGCCCGCGCGGCGGCGAGGCGCGCGCGATATCCGATCTCGTCC CCGAAATCGGCCGCACCGCCTTTCGCAAGTTCGGCTTCGTCCAGTCGTCGGTGGTCAGCCGCTGGCGCGAGATCGTCGGC GACCGCCTCGCCGACGTGACGCAGCCCGCGATGATCCGCTTCCCCGTGGGGCAAAAGGCGGGCGGGACGCTGCACCTGAC GATCAGCGGCGCACACGCGCCGATGCTCCAGCATGTCGCGCCCGACATCGTCGCCGCGGTCAACCGCTTCTTCGGCTATG CCGCGATCGCCACCGTCCGCATGACGCATGGACAGGTCACTCCCGCCGCCCCCGTTCAGCCGCCAGCCATGCTGAAACCC GTACCCGCCGAACTGGGGGACAGCCTGCGCGACATTGGCGACCCGGAGCTGCGCACCGTGCTCGAACGCATGGCCGCGGG CCTCGCGGCGCCGCCGCGGCTCCCCAAGATCAGCTAG
Upstream 100 bases:
>100_bases CGGCCTTGCGCAAGGCCGATGGCCCCCACCCCAACCCCTCCCCTGAAGGGGAGGGGCGATTCCATGCCGATAGTCTGGAC GCTCACCCCCCGCCTATGGC
Downstream 100 bases:
>100_bases GGCCAACAGCATGTCCGCTTTCGACGATCCGCTTCTCGACCGCCGCACCGCGGTGCTTGCGCTTTCGGGCGCCGCGCTGA CGCTGATGGCCGCCACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MASGMTKPTGDDAPAKKAKTKGGAKVGAKPAKAPARRYERPRGGEARAISDLVPEIGRTAFRKFGFVQSSVVSRWREIVG DRLADVTQPAMIRFPVGQKAGGTLHLTISGAHAPMLQHVAPDIVAAVNRFFGYAAIATVRMTHGQVTPAAPVQPPAMLKP VPAELGDSLRDIGDPELRTVLERMAAGLAAPPRLPKIS
Sequences:
>Translated_198_residues MASGMTKPTGDDAPAKKAKTKGGAKVGAKPAKAPARRYERPRGGEARAISDLVPEIGRTAFRKFGFVQSSVVSRWREIVG DRLADVTQPAMIRFPVGQKAGGTLHLTISGAHAPMLQHVAPDIVAAVNRFFGYAAIATVRMTHGQVTPAAPVQPPAMLKP VPAELGDSLRDIGDPELRTVLERMAAGLAAPPRLPKIS >Mature_197_residues ASGMTKPTGDDAPAKKAKTKGGAKVGAKPAKAPARRYERPRGGEARAISDLVPEIGRTAFRKFGFVQSSVVSRWREIVGD RLADVTQPAMIRFPVGQKAGGTLHLTISGAHAPMLQHVAPDIVAAVNRFFGYAAIATVRMTHGQVTPAAPVQPPAMLKPV PAELGDSLRDIGDPELRTVLERMAAGLAAPPRLPKIS
Specific function: Unknown
COG id: COG5389
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20898; Mature: 20766
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGMTKPTGDDAPAKKAKTKGGAKVGAKPAKAPARRYERPRGGEARAISDLVPEIGRTA CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH FRKFGFVQSSVVSRWREIVGDRLADVTQPAMIRFPVGQKAGGTLHLTISGAHAPMLQHVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH PDIVAAVNRFFGYAAIATVRMTHGQVTPAAPVQPPAMLKPVPAELGDSLRDIGDPELRTV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCHHHHHH LERMAAGLAAPPRLPKIS HHHHHHCCCCCCCCCCCC >Mature Secondary Structure ASGMTKPTGDDAPAKKAKTKGGAKVGAKPAKAPARRYERPRGGEARAISDLVPEIGRTA CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH FRKFGFVQSSVVSRWREIVGDRLADVTQPAMIRFPVGQKAGGTLHLTISGAHAPMLQHVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH PDIVAAVNRFFGYAAIATVRMTHGQVTPAAPVQPPAMLKPVPAELGDSLRDIGDPELRTV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCHHHHHH LERMAAGLAAPPRLPKIS HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA