Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is aroH [H]

Identifier: 103487693

GI number: 103487693

Start: 2322722

End: 2324095

Strand: Direct

Name: aroH [H]

Synonym: Sala_2212

Alternate gene names: 103487693

Gene position: 2322722-2324095 (Clockwise)

Preceding gene: 103487689

Following gene: 103487696

Centisome position: 69.44

GC content: 65.07

Gene sequence:

>1374_bases
ATGACGAAAAACTGGCAACCGCATAGCTGGCGCACGCACGAGGCCCGCCAGCTGCCCACCTATCGCGACGCCGATGCACT
CGCGGCCGCCGAACGCGAGCTGGCGAACTATCCGCCGCTCGTCTTTGCGGGCGAGGCGCGCGAACTGACGAACGAACTCG
CGCGCGTCGCGGAGGGCAGGGCGTTCCTGCTCCAGGGCGGCGACTGCGCCGAAAGCTTTGCCGAGTTCCACCCGAACAAT
ATCCGCGACACATTTCGTGTGCTGCTCCAGATGGCGGTGGTGCTGACCTTCGCCTCGAAAATGCCCGTGGTAAAGCTCGG
CCGCATGGCGGGGCAGTTCGCCAAGCCGCGTTCGGCGGACATGGAAGAGGTGGATGGCGTCGCGCTGCCCAGCTATCGCG
GCGACATCATCAACGACATCGCGTTCGAGGAAGCCGGCCGCGAGCCCGACCCCGCGCGGATGGTCAAGGCCTACAACCAG
TCGGCGGCGACGCTCAACCTGCTGCGCGCTTTCGCGGGCGGTGGCTATGCCAATCTGCACCAGGTCAACGCCTGGACGCA
CGACTTCATGGACCGCAGCCCGTGGGCGAAGAAATATCAGGAAACCGCAGGCCGCATTTCCGAAGCGCTCGCCTTCATGG
AAGCGTGCGGCGTGACGCCCGAAACGGTTCCGCAGATCAAGGGCACCAGCTTCTACACCAGCCATGAGGCGCTGCTCCTC
CCCTATGAGCAGGCGCTGACCCGGCAGGACAGCCTGACCGGCGGCTGGTACGACACATCGGGCCACTTCCTGTGGGTCGG
CGACCGCACCCGTTTCGAAGGATCAGCGCATATCGAATATCTCCGCGGGATCGGCAATCCGGTCGGCATGAAATGCGGAC
CGAGCCTCGAACCCGACGTGCTGCTGCGCCTGCTCGACACGCTGAATCCCAACCATGTGCCCGGCCGCATGACGCTCATC
ACGCGCTATGGCCACGACAAGATCGAGGCGCATCTGCCCAGGCTCGTGCGCGCGGTGAAGGAATCGGGCCATCCCGTCGT
CTGGTCGTGCGACCCGATGCACGGCAATGTCATCAAGACCTCGACCGGCTACAAGACGCGCCCGTTCGAGCGCATCCTCG
CCGAAGTGCGCGGCTTCTTCGCCGTCCACCGCGCCGAGGGCACGCATGGCGGCGGCATCCATATCGAGATGACCGGCCAG
AATGTCACCGAATGCACCGGCGGCGCGATGGACGTGACCCAGATGGACCTTGCCGACCGCTATCACACGCATTGCGACCC
GCGTTTGAATGCGGGGCAGAGCCTCGAACTCGCCTTCCTGCTGGCGGAGATGCTCAATCAGGAAATGAGCGAGCGGGCGA
AGCAGGCGGCGTAA

Upstream 100 bases:

>100_bases
ACGATAATGCTAATTTTCAGCCTCGCGCGCTCGGCAAACATTGCGCCCGACGGGCATTCACGCCATGGGGCGCATGATTC
GAAAATGAAATGACAGGCAG

Downstream 100 bases:

>100_bases
GCCACTTCGTCATTGCGAGCGAAGCGAAGCAATCTCCAGCCCTCGACCTTTGCGTAAGATCGAGGGCTGGAGATTGCCGC
GTCGCCTCCGGCTCCTCGCA

Product: phospho-2-dehydro-3-deoxyheptonate aldolase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTKNWQPHSWRTHEARQLPTYRDADALAAAERELANYPPLVFAGEARELTNELARVAEGRAFLLQGGDCAESFAEFHPNN
IRDTFRVLLQMAVVLTFASKMPVVKLGRMAGQFAKPRSADMEEVDGVALPSYRGDIINDIAFEEAGREPDPARMVKAYNQ
SAATLNLLRAFAGGGYANLHQVNAWTHDFMDRSPWAKKYQETAGRISEALAFMEACGVTPETVPQIKGTSFYTSHEALLL
PYEQALTRQDSLTGGWYDTSGHFLWVGDRTRFEGSAHIEYLRGIGNPVGMKCGPSLEPDVLLRLLDTLNPNHVPGRMTLI
TRYGHDKIEAHLPRLVRAVKESGHPVVWSCDPMHGNVIKTSTGYKTRPFERILAEVRGFFAVHRAEGTHGGGIHIEMTGQ
NVTECTGGAMDVTQMDLADRYHTHCDPRLNAGQSLELAFLLAEMLNQEMSERAKQAA

Sequences:

>Translated_457_residues
MTKNWQPHSWRTHEARQLPTYRDADALAAAERELANYPPLVFAGEARELTNELARVAEGRAFLLQGGDCAESFAEFHPNN
IRDTFRVLLQMAVVLTFASKMPVVKLGRMAGQFAKPRSADMEEVDGVALPSYRGDIINDIAFEEAGREPDPARMVKAYNQ
SAATLNLLRAFAGGGYANLHQVNAWTHDFMDRSPWAKKYQETAGRISEALAFMEACGVTPETVPQIKGTSFYTSHEALLL
PYEQALTRQDSLTGGWYDTSGHFLWVGDRTRFEGSAHIEYLRGIGNPVGMKCGPSLEPDVLLRLLDTLNPNHVPGRMTLI
TRYGHDKIEAHLPRLVRAVKESGHPVVWSCDPMHGNVIKTSTGYKTRPFERILAEVRGFFAVHRAEGTHGGGIHIEMTGQ
NVTECTGGAMDVTQMDLADRYHTHCDPRLNAGQSLELAFLLAEMLNQEMSERAKQAA
>Mature_456_residues
TKNWQPHSWRTHEARQLPTYRDADALAAAERELANYPPLVFAGEARELTNELARVAEGRAFLLQGGDCAESFAEFHPNNI
RDTFRVLLQMAVVLTFASKMPVVKLGRMAGQFAKPRSADMEEVDGVALPSYRGDIINDIAFEEAGREPDPARMVKAYNQS
AATLNLLRAFAGGGYANLHQVNAWTHDFMDRSPWAKKYQETAGRISEALAFMEACGVTPETVPQIKGTSFYTSHEALLLP
YEQALTRQDSLTGGWYDTSGHFLWVGDRTRFEGSAHIEYLRGIGNPVGMKCGPSLEPDVLLRLLDTLNPNHVPGRMTLIT
RYGHDKIEAHLPRLVRAVKESGHPVVWSCDPMHGNVIKTSTGYKTRPFERILAEVRGFFAVHRAEGTHGGGIHIEMTGQN
VTECTGGAMDVTQMDLADRYHTHCDPRLNAGQSLELAFLLAEMLNQEMSERAKQAA

Specific function: Unknown

COG id: COG3200

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II DAHP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002480 [H]

Pfam domain/function: PF01474 DAHP_synth_2 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 50764; Mature: 50633

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNWQPHSWRTHEARQLPTYRDADALAAAERELANYPPLVFAGEARELTNELARVAEGR
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCC
AFLLQGGDCAESFAEFHPNNIRDTFRVLLQMAVVLTFASKMPVVKLGRMAGQFAKPRSAD
EEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
MEEVDGVALPSYRGDIINDIAFEEAGREPDPARMVKAYNQSAATLNLLRAFAGGGYANLH
HHHHCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH
QVNAWTHDFMDRSPWAKKYQETAGRISEALAFMEACGVTPETVPQIKGTSFYTSHEALLL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCEEEE
PYEQALTRQDSLTGGWYDTSGHFLWVGDRTRFEGSAHIEYLRGIGNPVGMKCGPSLEPDV
EHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
LLRLLDTLNPNHVPGRMTLITRYGHDKIEAHLPRLVRAVKESGHPVVWSCDPMHGNVIKT
HHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE
STGYKTRPFERILAEVRGFFAVHRAEGTHGGGIHIEMTGQNVTECTGGAMDVTQMDLADR
CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHH
YHTHCDPRLNAGQSLELAFLLAEMLNQEMSERAKQAA
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKNWQPHSWRTHEARQLPTYRDADALAAAERELANYPPLVFAGEARELTNELARVAEGR
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCC
AFLLQGGDCAESFAEFHPNNIRDTFRVLLQMAVVLTFASKMPVVKLGRMAGQFAKPRSAD
EEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
MEEVDGVALPSYRGDIINDIAFEEAGREPDPARMVKAYNQSAATLNLLRAFAGGGYANLH
HHHHCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH
QVNAWTHDFMDRSPWAKKYQETAGRISEALAFMEACGVTPETVPQIKGTSFYTSHEALLL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCEEEE
PYEQALTRQDSLTGGWYDTSGHFLWVGDRTRFEGSAHIEYLRGIGNPVGMKCGPSLEPDV
EHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
LLRLLDTLNPNHVPGRMTLITRYGHDKIEAHLPRLVRAVKESGHPVVWSCDPMHGNVIKT
HHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE
STGYKTRPFERILAEVRGFFAVHRAEGTHGGGIHIEMTGQNVTECTGGAMDVTQMDLADR
CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHH
YHTHCDPRLNAGQSLELAFLLAEMLNQEMSERAKQAA
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953; 8760910 [H]