Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is qmcA [H]

Identifier: 103487696

GI number: 103487696

Start: 2326796

End: 2327710

Strand: Direct

Name: qmcA [H]

Synonym: Sala_2215

Alternate gene names: 103487696

Gene position: 2326796-2327710 (Clockwise)

Preceding gene: 103487693

Following gene: 103487697

Centisome position: 69.56

GC content: 62.51

Gene sequence:

>915_bases
ATGGAATTCGCACTCGCACTGGTGGTTCTGGCGCTGGTGTTCCTGATCTGGGCGTTAACGCCCGTGCGCCAGGGTTTTGC
CTATACGATCGAGCGCTTCGGCCGTTACACGCACACGGCGCAGCCGGGGCTCAATTTCATCATGCCGATCTTCGACCGGG
TGGGTCGGAAAGTGAACATGATGGAGCAGGTGCTCGACATTCCGGGGCAGGAAATCATCACCAAGGACAATGCGATGGTC
GCGGTCGACGGTGTCGTGTTCTTTCAGGTGCTCGACGCCGCGAAGGCCGCCTATGAGGTCAGCGACCTGTATCTTTCGAT
CATGAACCTGACGACGACCAACCTGCGCACCGTGATGGGGTCGATGGACCTCGACGAAACGCTGTCGAAGCGCGACGAAA
TCAACGCGCGGCTGCTCCACGTCGTCGACGATGCGACAACGCCGTGGGGGGTCAAGATCACCCGCGTCGAGATCAAGGAC
ATCCGCCCGCCCGCCGACATTTCGAACGCCATGGCGCGCCAGATGAAGGCCGAGCGCGAAAAACGCGCCGCGATCCTGGA
GGCCGAGGGACTGCGCGCCTCCGAAATCCTCCGCGCCGAGGGCGAAAAGCAGGGCCAGATTTTGCAGGCCGAAGGCCGCC
GCGAGGCCGCCTTCCGCGATGCCGAGGCGCGCGAACGCGAGGCCGAAGCCGAAGCAAAGGCGACGCAGATGGTCAGCGAC
GCGATCGCCAGTGGCAATGCGCAGGCGATCAACTATTTCATCGCGCAAAAATATGTCGAGGCGGTCAGCCAGTTCGCAAC
CAGCCCGAACAGCAAGACGATCCTCTTCCCGGTCGAGGCGACGCAGTTGATCGGGACTTTGGGCGGCATCGGCGAACTCG
CCAAGGATGCGTTCGAACGCAAGGGAGGCGCCTGA

Upstream 100 bases:

>100_bases
GGCGAAGTCGGTCATGCGCTTTTCTGTGGCGCAGCCGCGCCATTGCCGCAATAAGGAAGGCGGGTTTGCAAAGACGCTTG
TTTGCAAGAGGGGATGATCG

Downstream 100 bases:

>100_bases
CATGCCCGACTGGCTGACCAATATGGAGCCGCATTGGGCGTGGCTGTCGCTCGGCGTGCTGCTTGCCGCCGCCGAAATCG
TTGCGCCGGGCTTCTTCCTC

Product: band 7 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MEFALALVVLALVFLIWALTPVRQGFAYTIERFGRYTHTAQPGLNFIMPIFDRVGRKVNMMEQVLDIPGQEIITKDNAMV
AVDGVVFFQVLDAAKAAYEVSDLYLSIMNLTTTNLRTVMGSMDLDETLSKRDEINARLLHVVDDATTPWGVKITRVEIKD
IRPPADISNAMARQMKAEREKRAAILEAEGLRASEILRAEGEKQGQILQAEGRREAAFRDAEAREREAEAEAKATQMVSD
AIASGNAQAINYFIAQKYVEAVSQFATSPNSKTILFPVEATQLIGTLGGIGELAKDAFERKGGA

Sequences:

>Translated_304_residues
MEFALALVVLALVFLIWALTPVRQGFAYTIERFGRYTHTAQPGLNFIMPIFDRVGRKVNMMEQVLDIPGQEIITKDNAMV
AVDGVVFFQVLDAAKAAYEVSDLYLSIMNLTTTNLRTVMGSMDLDETLSKRDEINARLLHVVDDATTPWGVKITRVEIKD
IRPPADISNAMARQMKAEREKRAAILEAEGLRASEILRAEGEKQGQILQAEGRREAAFRDAEAREREAEAEAKATQMVSD
AIASGNAQAINYFIAQKYVEAVSQFATSPNSKTILFPVEATQLIGTLGGIGELAKDAFERKGGA
>Mature_304_residues
MEFALALVVLALVFLIWALTPVRQGFAYTIERFGRYTHTAQPGLNFIMPIFDRVGRKVNMMEQVLDIPGQEIITKDNAMV
AVDGVVFFQVLDAAKAAYEVSDLYLSIMNLTTTNLRTVMGSMDLDETLSKRDEINARLLHVVDDATTPWGVKITRVEIKD
IRPPADISNAMARQMKAEREKRAAILEAEGLRASEILRAEGEKQGQILQAEGRREAAFRDAEAREREAEAEAKATQMVSD
AIASGNAQAINYFIAQKYVEAVSQFATSPNSKTILFPVEATQLIGTLGGIGELAKDAFERKGGA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=261, Percent_Identity=35.2490421455939, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI21686995, Length=202, Percent_Identity=35.1485148514851, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI221316744, Length=202, Percent_Identity=35.1485148514851, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI38016911, Length=200, Percent_Identity=37.5, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI7657615, Length=187, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=8e-19,
Organism=Escherichia coli, GI1786697, Length=299, Percent_Identity=61.5384615384615, Blast_Score=402, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI32564147, Length=264, Percent_Identity=37.1212121212121, Blast_Score=174, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17569493, Length=192, Percent_Identity=33.8541666666667, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI193209764, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17569499, Length=163, Percent_Identity=39.8773006134969, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=162, Percent_Identity=41.358024691358, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71987612, Length=162, Percent_Identity=41.358024691358, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987621, Length=162, Percent_Identity=41.358024691358, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=149, Percent_Identity=33.5570469798658, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71989948, Length=159, Percent_Identity=37.1069182389937, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71989955, Length=144, Percent_Identity=39.5833333333333, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17570459, Length=202, Percent_Identity=35.1485148514851, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=158, Percent_Identity=37.3417721518987, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193210507, Length=192, Percent_Identity=34.8958333333333, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17570161, Length=192, Percent_Identity=34.8958333333333, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=107, Percent_Identity=36.4485981308411, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17542664, Length=171, Percent_Identity=28.6549707602339, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI45550506, Length=261, Percent_Identity=34.0996168582375, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI62484448, Length=207, Percent_Identity=37.6811594202899, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI281365664, Length=207, Percent_Identity=37.6811594202899, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24657857, Length=207, Percent_Identity=37.6811594202899, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI62484274, Length=207, Percent_Identity=37.6811594202899, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI18860517, Length=166, Percent_Identity=38.5542168674699, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI45556022, Length=162, Percent_Identity=38.8888888888889, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21356845, Length=194, Percent_Identity=31.4432989690722, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281361633, Length=195, Percent_Identity=31.2820512820513, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI281361631, Length=195, Percent_Identity=31.2820512820513, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28573263, Length=196, Percent_Identity=30.6122448979592, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281361635, Length=140, Percent_Identity=30, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33500; Mature: 33500

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFALALVVLALVFLIWALTPVRQGFAYTIERFGRYTHTAQPGLNFIMPIFDRVGRKVNM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
MEQVLDIPGQEIITKDNAMVAVDGVVFFQVLDAAKAAYEVSDLYLSIMNLTTTNLRTVMG
HHHHHCCCCHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SMDLDETLSKRDEINARLLHVVDDATTPWGVKITRVEIKDIRPPADISNAMARQMKAERE
CCCHHHHHHHHHHCCHHHEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
KRAAILEAEGLRASEILRAEGEKQGQILQAEGRREAAFRDAEAREREAEAEAKATQMVSD
HHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
AIASGNAQAINYFIAQKYVEAVSQFATSPNSKTILFPVEATQLIGTLGGIGELAKDAFER
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHH
KGGA
CCCC
>Mature Secondary Structure
MEFALALVVLALVFLIWALTPVRQGFAYTIERFGRYTHTAQPGLNFIMPIFDRVGRKVNM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
MEQVLDIPGQEIITKDNAMVAVDGVVFFQVLDAAKAAYEVSDLYLSIMNLTTTNLRTVMG
HHHHHCCCCHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SMDLDETLSKRDEINARLLHVVDDATTPWGVKITRVEIKDIRPPADISNAMARQMKAERE
CCCHHHHHHHHHHCCHHHEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
KRAAILEAEGLRASEILRAEGEKQGQILQAEGRREAAFRDAEAREREAEAEAKATQMVSD
HHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
AIASGNAQAINYFIAQKYVEAVSQFATSPNSKTILFPVEATQLIGTLGGIGELAKDAFER
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHH
KGGA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]