| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is glnE [H]
Identifier: 103487666
GI number: 103487666
Start: 2294128
End: 2296845
Strand: Reverse
Name: glnE [H]
Synonym: Sala_2185
Alternate gene names: 103487666
Gene position: 2296845-2294128 (Counterclockwise)
Preceding gene: 103487667
Following gene: 103487665
Centisome position: 68.66
GC content: 70.93
Gene sequence:
>2718_bases ATGACTGCATCCGACGTTTCCAGCCGCCAATCGGCGCTCGACCGACTCACCGCCAACGCGCCGTTTCTGGCGCGGCTGGC CGAACTCAACCCCGAAGATGCGACGCGCTTCCTTGCCGATGGCACCGATGCCGCGCTCGCCGCGGTGACGCCGCCGGCGA TCGACGACGACATCATGCGCACGCTTCGCCTATGGCGCGGGCGGATCGCCCTGCTGCTTGCGCTCGGCGACCTGTCGGGC GAGCATGATGTCGCGAAGACGACGCGGCTTCTGTCCGATTTCGCCGACCGGGCCTGCGATATCGCGCTCGCCGCGGCCTT TGCCGAGCGCGTGCCGGGCGAGGCTTCGCGCGGGCTGGCGGTGATCGCGCTCGGCAAGCTCGGCAGCCACGAACTCAACT ATTCGTCGGACATCGACCCGATCCTGATCTTCGACCCCGATAGCCTTCCCCGGCGGTCGCGCGACGACCCCGACGAGGCG GCGGTGCGGATCGCGCGGCGGATGGTCGAGATATTGTCGGCGCGCACCGCCGACGGCCATGTGCTGCGCGTCGACCTGCG GCTCCGCCCGCATCCCGAGGTGACGCCGATCGTGCTGTCCGAAAACGCTGCCATATCCTATTATGAATCCGAAGCGCTGG CGTGGGAGCAGGCGGCGTTTATCCGCAGCCGCGCGTCGGCGGGCGACCGTGCGCTCGGCGCGCATTTTCTCGCCGCGATC CACCCCTTCATCTGGCGGCGCAGCCTCGATTTTCGCCAGCTCAAGGAAATCGGCGCGATGAGCGACCGCATTCGCGATCA TTTCGCGCAAGGGCAGGCGTTCGGCCCCGGCTATGACCTGAAACGCGGTCGCGGCGGCATCCGCGAGATCGAGTTTTTCG CGCAGGTTCACCAGCTCATCTATGGTGGGCGCGACCCGTCGCTGCGCGCGCCCGCGACGGTCGACGCGCTCGCGGCGCTC GCCGCGGCGGGGCGAATCGACGGCGATGTCGCGGCGCGGCTGGCGGATCATTATGCGACGCTGCGCCGCATCGAGCATCG GCTCCAGATGATCGAGGACCAGCAGACGCATGGCCTGCCGGTGCAGGCCGCGGCGCTCGACGCCGTCGCGCGGCTCGACG GGCTGACCGACGGCGCGGCGCTGCTCGCGGCGCTCGAACCGGTCACCGCCGATGTCGCCGCCTGTTACGATCGGCTGGTC GCCGAACGCGCCGCGACGACCGGGCTGCCGCGCGACGAGGGCGCGCTGGCGCCCCAACTGGCCGCAGCGGGGTTCGACCC GCCCGATGCGGCGCTGCGCACCATCGCCGAATGGCGCGGCGGCAAGCTGCGCGCGCTGCGCAGCGCGGCGGCGCTCGAGG CGCTGGAGACGTTGCTCCCCGAACTGGTCCGCGCGATCGGCGCCGCGCCCGATCCGCAGGCGACGTTGCTGCGCTTCGAC AAGCTCGTCGCGGGGCTGCCGAGCGCGGTGGGCTTTTTCCACCTGCTCGCGGCGCAGCCCGAACTGGCGAAGATCGCGAC GCGCATCCTGTCGCTTGCGCCGACGCTGGCCGATGCGCTCGGCGCGCGCGCCGAACTGATCGAGGGACTGATCGACAAGC GCGCGTTCGAGGCGCCCGCGAACAAGGCCGACCTGCTCGCCGAATGGGCGCCGGGGCTCGCGGGACTCGACTATGAACGC TTGCTCGACCGCGTGCGCGACCGCGTCGGCGAGCGGCGCTTTGCCTATGGCGTCCAGCTGATCGCCGGGGCGAACGACCC GCTCGCCATCGCCTGCGGCTATTCGGAGCTTGCCGAAGCGGCGTTGCAGGTGCTCGCCGACGCGACCGTCGCCGAGTTTG TCGAGGCGCATGGGCGGGTGCCGGGCAGCGAGCTGGTCGTGCTTGCGCTCGGGCGGCTTGGGGGGCGCGCGCTCACCCAT GCCTCCGACCTCGACCTCATCTATCTTTTCACCGGCGATCATCTTGCCGAATCGGACGGCCCGCGCCCGCTTGGCGCGAC GACCTATTACAACCGCCTCGCGCAGCGCGTGACGGCGGCGATGTCGGTGCCGACCGCGGCGGGCAAGCTTTATGATGTCG ATACGCGGCTGCGCCCGCAAGGCGCGCAGGGCCCGCTCGTCGTCACGCTCGACAGCTTCGCGCGCTACCAGCACGAGGAG GCGTGGACATGGGAGCATATGGCGCTGCTCCGCGCGCGGCCGGTTTATGGATCGGATGCGGCGCGTGCCGAGCTGCAACG CATCATCGCCGACCTGCTCGCCGTGCCGCGCGATCACGACGCCGTGGCACGCGATGCCGCCGCGATGCGCGACAAGATCG CCGCGCACAAGCCGCCGCGGGGCCCGCTCGACATCAAGGGTGGACCCGGCGGGCTCGTCGATCTCGAGTTTGCGATGCAG GTGACGCAGCTTGCGACCGGGCGATGCCACGACCCCAATATCGGCTCGGCGCTCGCCTGCATGACGAGCGAAGGGCTGGC GCCCGCCGCGACCTGCAACGCGCACGGTCTGCTCGCGCGGATGCTCGTCATGCTGCGGCTGACCGCGCCCGACGGGGAAC CCGCGACCGCCGCCGCGCGTCAACTCGTCGCGAGCCAGTGCGGCGAACCCGGCTGGCCGCAGCTGCTTGCCGCGCACGAT GCGGCGCGGCAGGAGATTGCGGCCTGGTGGGCCTCGATTCGGCCTGCCGCCCCCGCTGAGCAGGAGAAACAGCCATGA
Upstream 100 bases:
>100_bases CAGCGCGGCCGCGCACGCACTGCCAACGGCCCCCGCCTTCGCGGGGGCGACGGTGGAACCGTCTTGCCTCGTGCCGGGTC GCGGGCGATAGCAGCGCGCG
Downstream 100 bases:
>100_bases TCGCGATCGGCGACCCCATCCCCGATTTGAAACTTCCGGACGCCGATGGCGCGGCGATCGAGCTGGCCGCGATGAAAGGC GCGCCGCTGGTCGTCTATTT
Product: glutamate-ammonia-ligase adenylyltransferase
Products: NA
Alternate protein names: Glutamine-synthetase adenylyltransferase; ATase; [Glutamate--ammonia-ligase] adenylyltransferase [H]
Number of amino acids: Translated: 905; Mature: 904
Protein sequence:
>905_residues MTASDVSSRQSALDRLTANAPFLARLAELNPEDATRFLADGTDAALAAVTPPAIDDDIMRTLRLWRGRIALLLALGDLSG EHDVAKTTRLLSDFADRACDIALAAAFAERVPGEASRGLAVIALGKLGSHELNYSSDIDPILIFDPDSLPRRSRDDPDEA AVRIARRMVEILSARTADGHVLRVDLRLRPHPEVTPIVLSENAAISYYESEALAWEQAAFIRSRASAGDRALGAHFLAAI HPFIWRRSLDFRQLKEIGAMSDRIRDHFAQGQAFGPGYDLKRGRGGIREIEFFAQVHQLIYGGRDPSLRAPATVDALAAL AAAGRIDGDVAARLADHYATLRRIEHRLQMIEDQQTHGLPVQAAALDAVARLDGLTDGAALLAALEPVTADVAACYDRLV AERAATTGLPRDEGALAPQLAAAGFDPPDAALRTIAEWRGGKLRALRSAAALEALETLLPELVRAIGAAPDPQATLLRFD KLVAGLPSAVGFFHLLAAQPELAKIATRILSLAPTLADALGARAELIEGLIDKRAFEAPANKADLLAEWAPGLAGLDYER LLDRVRDRVGERRFAYGVQLIAGANDPLAIACGYSELAEAALQVLADATVAEFVEAHGRVPGSELVVLALGRLGGRALTH ASDLDLIYLFTGDHLAESDGPRPLGATTYYNRLAQRVTAAMSVPTAAGKLYDVDTRLRPQGAQGPLVVTLDSFARYQHEE AWTWEHMALLRARPVYGSDAARAELQRIIADLLAVPRDHDAVARDAAAMRDKIAAHKPPRGPLDIKGGPGGLVDLEFAMQ VTQLATGRCHDPNIGSALACMTSEGLAPAATCNAHGLLARMLVMLRLTAPDGEPATAAARQLVASQCGEPGWPQLLAAHD AARQEIAAWWASIRPAAPAEQEKQP
Sequences:
>Translated_905_residues MTASDVSSRQSALDRLTANAPFLARLAELNPEDATRFLADGTDAALAAVTPPAIDDDIMRTLRLWRGRIALLLALGDLSG EHDVAKTTRLLSDFADRACDIALAAAFAERVPGEASRGLAVIALGKLGSHELNYSSDIDPILIFDPDSLPRRSRDDPDEA AVRIARRMVEILSARTADGHVLRVDLRLRPHPEVTPIVLSENAAISYYESEALAWEQAAFIRSRASAGDRALGAHFLAAI HPFIWRRSLDFRQLKEIGAMSDRIRDHFAQGQAFGPGYDLKRGRGGIREIEFFAQVHQLIYGGRDPSLRAPATVDALAAL AAAGRIDGDVAARLADHYATLRRIEHRLQMIEDQQTHGLPVQAAALDAVARLDGLTDGAALLAALEPVTADVAACYDRLV AERAATTGLPRDEGALAPQLAAAGFDPPDAALRTIAEWRGGKLRALRSAAALEALETLLPELVRAIGAAPDPQATLLRFD KLVAGLPSAVGFFHLLAAQPELAKIATRILSLAPTLADALGARAELIEGLIDKRAFEAPANKADLLAEWAPGLAGLDYER LLDRVRDRVGERRFAYGVQLIAGANDPLAIACGYSELAEAALQVLADATVAEFVEAHGRVPGSELVVLALGRLGGRALTH ASDLDLIYLFTGDHLAESDGPRPLGATTYYNRLAQRVTAAMSVPTAAGKLYDVDTRLRPQGAQGPLVVTLDSFARYQHEE AWTWEHMALLRARPVYGSDAARAELQRIIADLLAVPRDHDAVARDAAAMRDKIAAHKPPRGPLDIKGGPGGLVDLEFAMQ VTQLATGRCHDPNIGSALACMTSEGLAPAATCNAHGLLARMLVMLRLTAPDGEPATAAARQLVASQCGEPGWPQLLAAHD AARQEIAAWWASIRPAAPAEQEKQP >Mature_904_residues TASDVSSRQSALDRLTANAPFLARLAELNPEDATRFLADGTDAALAAVTPPAIDDDIMRTLRLWRGRIALLLALGDLSGE HDVAKTTRLLSDFADRACDIALAAAFAERVPGEASRGLAVIALGKLGSHELNYSSDIDPILIFDPDSLPRRSRDDPDEAA VRIARRMVEILSARTADGHVLRVDLRLRPHPEVTPIVLSENAAISYYESEALAWEQAAFIRSRASAGDRALGAHFLAAIH PFIWRRSLDFRQLKEIGAMSDRIRDHFAQGQAFGPGYDLKRGRGGIREIEFFAQVHQLIYGGRDPSLRAPATVDALAALA AAGRIDGDVAARLADHYATLRRIEHRLQMIEDQQTHGLPVQAAALDAVARLDGLTDGAALLAALEPVTADVAACYDRLVA ERAATTGLPRDEGALAPQLAAAGFDPPDAALRTIAEWRGGKLRALRSAAALEALETLLPELVRAIGAAPDPQATLLRFDK LVAGLPSAVGFFHLLAAQPELAKIATRILSLAPTLADALGARAELIEGLIDKRAFEAPANKADLLAEWAPGLAGLDYERL LDRVRDRVGERRFAYGVQLIAGANDPLAIACGYSELAEAALQVLADATVAEFVEAHGRVPGSELVVLALGRLGGRALTHA SDLDLIYLFTGDHLAESDGPRPLGATTYYNRLAQRVTAAMSVPTAAGKLYDVDTRLRPQGAQGPLVVTLDSFARYQHEEA WTWEHMALLRARPVYGSDAARAELQRIIADLLAVPRDHDAVARDAAAMRDKIAAHKPPRGPLDIKGGPGGLVDLEFAMQV TQLATGRCHDPNIGSALACMTSEGLAPAATCNAHGLLARMLVMLRLTAPDGEPATAAARQLVASQCGEPGWPQLLAAHDA ARQEIAAWWASIRPAAPAEQEKQP
Specific function: Adenylation and deadenylation of glutamate--ammonia ligase [H]
COG id: COG1391
COG function: function code OT; Glutamine synthetase adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnE family [H]
Homologues:
Organism=Escherichia coli, GI1789433, Length=824, Percent_Identity=31.1893203883495, Blast_Score=317, Evalue=3e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023057 - InterPro: IPR005190 - InterPro: IPR013546 [H]
Pfam domain/function: PF08335 GlnD_UR_UTase; PF03710 GlnE [H]
EC number: =2.7.7.42 [H]
Molecular weight: Translated: 96776; Mature: 96645
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASDVSSRQSALDRLTANAPFLARLAELNPEDATRFLADGTDAALAAVTPPAIDDDIMR CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHH TLRLWRGRIALLLALGDLSGEHDVAKTTRLLSDFADRACDIALAAAFAERVPGEASRGLA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VIALGKLGSHELNYSSDIDPILIFDPDSLPRRSRDDPDEAAVRIARRMVEILSARTADGH EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC VLRVDLRLRPHPEVTPIVLSENAAISYYESEALAWEQAAFIRSRASAGDRALGAHFLAAI EEEEEEEECCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH HPFIWRRSLDFRQLKEIGAMSDRIRDHFAQGQAFGPGYDLKRGRGGIREIEFFAQVHQLI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YGGRDPSLRAPATVDALAALAAAGRIDGDVAARLADHYATLRRIEHRLQMIEDQQTHGLP HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VQAAALDAVARLDGLTDGAALLAALEPVTADVAACYDRLVAERAATTGLPRDEGALAPQL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH AAAGFDPPDAALRTIAEWRGGKLRALRSAAALEALETLLPELVRAIGAAPDPQATLLRFD HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KLVAGLPSAVGFFHLLAAQPELAKIATRILSLAPTLADALGARAELIEGLIDKRAFEAPA HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC NKADLLAEWAPGLAGLDYERLLDRVRDRVGERRFAYGVQLIAGANDPLAIACGYSELAEA CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEECCCCCEEEEECHHHHHHH ALQVLADATVAEFVEAHGRVPGSELVVLALGRLGGRALTHASDLDLIYLFTGDHLAESDG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCEEEEEECCHHHCCCC PRPLGATTYYNRLAQRVTAAMSVPTAAGKLYDVDTRLRPQGAQGPLVVTLDSFARYQHEE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHH AWTWEHMALLRARPVYGSDAARAELQRIIADLLAVPRDHDAVARDAAAMRDKIAAHKPPR CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC GPLDIKGGPGGLVDLEFAMQVTQLATGRCHDPNIGSALACMTSEGLAPAATCNAHGLLAR CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH MLVMLRLTAPDGEPATAAARQLVASQCGEPGWPQLLAAHDAARQEIAAWWASIRPAAPAE HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC QEKQP CCCCC >Mature Secondary Structure TASDVSSRQSALDRLTANAPFLARLAELNPEDATRFLADGTDAALAAVTPPAIDDDIMR CCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHH TLRLWRGRIALLLALGDLSGEHDVAKTTRLLSDFADRACDIALAAAFAERVPGEASRGLA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VIALGKLGSHELNYSSDIDPILIFDPDSLPRRSRDDPDEAAVRIARRMVEILSARTADGH EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC VLRVDLRLRPHPEVTPIVLSENAAISYYESEALAWEQAAFIRSRASAGDRALGAHFLAAI EEEEEEEECCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH HPFIWRRSLDFRQLKEIGAMSDRIRDHFAQGQAFGPGYDLKRGRGGIREIEFFAQVHQLI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YGGRDPSLRAPATVDALAALAAAGRIDGDVAARLADHYATLRRIEHRLQMIEDQQTHGLP HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VQAAALDAVARLDGLTDGAALLAALEPVTADVAACYDRLVAERAATTGLPRDEGALAPQL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH AAAGFDPPDAALRTIAEWRGGKLRALRSAAALEALETLLPELVRAIGAAPDPQATLLRFD HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KLVAGLPSAVGFFHLLAAQPELAKIATRILSLAPTLADALGARAELIEGLIDKRAFEAPA HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC NKADLLAEWAPGLAGLDYERLLDRVRDRVGERRFAYGVQLIAGANDPLAIACGYSELAEA CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEECCCCCEEEEECHHHHHHH ALQVLADATVAEFVEAHGRVPGSELVVLALGRLGGRALTHASDLDLIYLFTGDHLAESDG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCEEEEEECCHHHCCCC PRPLGATTYYNRLAQRVTAAMSVPTAAGKLYDVDTRLRPQGAQGPLVVTLDSFARYQHEE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHH AWTWEHMALLRARPVYGSDAARAELQRIIADLLAVPRDHDAVARDAAAMRDKIAAHKPPR CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC GPLDIKGGPGGLVDLEFAMQVTQLATGRCHDPNIGSALACMTSEGLAPAATCNAHGLLAR CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH MLVMLRLTAPDGEPATAAARQLVASQCGEPGWPQLLAAHDAARQEIAAWWASIRPAAPAE HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC QEKQP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]