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The map label for this gene is ygaF [H]

Identifier: 103487665

GI number: 103487665

Start: 2293670

End: 2294131

Strand: Reverse

Name: ygaF [H]

Synonym: Sala_2184

Alternate gene names: 103487665

Gene position: 2294131-2293670 (Counterclockwise)

Preceding gene: 103487666

Following gene: 103487664

Centisome position: 68.58

GC content: 64.5

Gene sequence:

>462_bases
ATGATCGCGATCGGCGACCCCATCCCCGATTTGAAACTTCCGGACGCCGATGGCGCGGCGATCGAGCTGGCCGCGATGAA
AGGCGCGCCGCTGGTCGTCTATTTCTATCCGAAGGCCGACACGCCGGGCTGCACGACCGAGGCACAGGATTTCACGCGGC
TCGCGCCCGATTTTGCGCATCTGGGCGCGCAGGTGCTCGCGGTCTCGCGCGACGCCCCGGCGAAGCTCTGCAAGTTCCGC
GACAAATATGGGCTGACCGTGCGCCTCGCTTCGGACGAGGATGGCACGGCGTGCGAAGCCTTTGGCACCTGGGTCGAAAA
GCAGAATTACGGCCGCACCTATATGGGAATCGAACGCTCGACCTTCCTGTTCGGCCGCGACGGCAAGCTCGCGAAAGAGT
GGCGCAAGGTGCGCGTGAAGGGTCATGCCGATGCGGTGCTGGAGGCGGCGAAGGCACTTTGA

Upstream 100 bases:

>100_bases
GGCCGCAGCTGCTTGCCGCGCACGATGCGGCGCGGCAGGAGATTGCGGCCTGGTGGGCCTCGATTCGGCCTGCCGCCCCC
GCTGAGCAGGAGAAACAGCC

Downstream 100 bases:

>100_bases
TGGCCACCCTCGGCGAAGCCGCGCGCGCGGTGCTGCTGACTGCGGACCCACACGCCAAGCGCCGCGCGGCGCGCGGTCTG
GCGCGCGCCTGGCGGCGCGG

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MIAIGDPIPDLKLPDADGAAIELAAMKGAPLVVYFYPKADTPGCTTEAQDFTRLAPDFAHLGAQVLAVSRDAPAKLCKFR
DKYGLTVRLASDEDGTACEAFGTWVEKQNYGRTYMGIERSTFLFGRDGKLAKEWRKVRVKGHADAVLEAAKAL

Sequences:

>Translated_153_residues
MIAIGDPIPDLKLPDADGAAIELAAMKGAPLVVYFYPKADTPGCTTEAQDFTRLAPDFAHLGAQVLAVSRDAPAKLCKFR
DKYGLTVRLASDEDGTACEAFGTWVEKQNYGRTYMGIERSTFLFGRDGKLAKEWRKVRVKGHADAVLEAAKAL
>Mature_153_residues
MIAIGDPIPDLKLPDADGAAIELAAMKGAPLVVYFYPKADTPGCTTEAQDFTRLAPDFAHLGAQVLAVSRDAPAKLCKFR
DKYGLTVRLASDEDGTACEAFGTWVEKQNYGRTYMGIERSTFLFGRDGKLAKEWRKVRVKGHADAVLEAAKAL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=147, Percent_Identity=42.1768707482993, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16623; Mature: 16623

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIGDPIPDLKLPDADGAAIELAAMKGAPLVVYFYPKADTPGCTTEAQDFTRLAPDFAH
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHH
LGAQVLAVSRDAPAKLCKFRDKYGLTVRLASDEDGTACEAFGTWVEKQNYGRTYMGIERS
CCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCCC
TFLFGRDGKLAKEWRKVRVKGHADAVLEAAKAL
EEEEECCCHHHHHHHHEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAIGDPIPDLKLPDADGAAIELAAMKGAPLVVYFYPKADTPGCTTEAQDFTRLAPDFAH
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHH
LGAQVLAVSRDAPAKLCKFRDKYGLTVRLASDEDGTACEAFGTWVEKQNYGRTYMGIERS
CCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCCC
TFLFGRDGKLAKEWRKVRVKGHADAVLEAAKAL
EEEEECCCHHHHHHHHEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]