Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487664

Identifier: 103487664

GI number: 103487664

Start: 2292879

End: 2293670

Strand: Reverse

Name: 103487664

Synonym: Sala_2183

Alternate gene names: NA

Gene position: 2293670-2292879 (Counterclockwise)

Preceding gene: 103487665

Following gene: 103487663

Centisome position: 68.57

GC content: 68.94

Gene sequence:

>792_bases
ATGGCCACCCTCGGCGAAGCCGCGCGCGCGGTGCTGCTGACTGCGGACCCACACGCCAAGCGCCGCGCGGCGCGCGGTCT
GGCGCGCGCCTGGCGGCGCGGCGAGCTTGCGCATCGCTGTGACGTCGCGATGCCAGACCGGCCCGCACGGCCCGCGCGGC
CCGAACTGCTCGCGCCCGCGCAGATGCCGCGCCGCCGCAAGGGCGGGTCGGAGCGTGGCCGGATCGCGATGCTCCACGCG
CTCGCGCATATCGAGTTTGTCGCGATCGACCTGGCGGTCGATCTGGTCGGGCGCTTCGGCGGCGAGTTTCCGCGCGGATT
CGTCGACGACTGGATCGGCGTCGCCGCCGACGAGGCGATGCACTTTGCGCTGCTCGACCGGCGGCTGCGCCAGCTCGGCA
GCTTCTATGGCGATTTGCCCGCGCACGCGGGATTGTGGGAAGCGGCCGAAGCGACGCGCGACGACGCGCTCGCGCGGCTC
GCGATCGTGCCGATGGTATTGGAAGCGCGCGGGCTCGACGTCACCCCGGCGACGGTCGACCGCTTCCGCGCCGCGGGCGA
CGAGGTGTCGGCAAAGATTTTATCGCGTATTTACAACGATGAAATCCGCCATGTGCGCGCGGGCACCGTCTGGTTCGGGC
AAAAGTGCGACGAACTGGGATTCAACGCCGTCGAAACGTGGCACGCGCTCGTGAAATCGCGGTTTCGGGGGGCTTTGAAG
CCGCCTTTCAACGACTCGGCGCGTGCTCGCGCCGGTTTAACGCAAGAATACTACGCCGTTATTGCTTCGTAA

Upstream 100 bases:

>100_bases
CCTTCCTGTTCGGCCGCGACGGCAAGCTCGCGAAAGAGTGGCGCAAGGTGCGCGTGAAGGGTCATGCCGATGCGGTGCTG
GAGGCGGCGAAGGCACTTTG

Downstream 100 bases:

>100_bases
GGAGCAGGACAGCACACAGGCTTCCGCGGGGGATGAGCAATCATCCAGAGCAGGAATACCGGCACCAAGGCCCAGTTTCG
GGCTTTGGCGACATGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MATLGEAARAVLLTADPHAKRRAARGLARAWRRGELAHRCDVAMPDRPARPARPELLAPAQMPRRRKGGSERGRIAMLHA
LAHIEFVAIDLAVDLVGRFGGEFPRGFVDDWIGVAADEAMHFALLDRRLRQLGSFYGDLPAHAGLWEAAEATRDDALARL
AIVPMVLEARGLDVTPATVDRFRAAGDEVSAKILSRIYNDEIRHVRAGTVWFGQKCDELGFNAVETWHALVKSRFRGALK
PPFNDSARARAGLTQEYYAVIAS

Sequences:

>Translated_263_residues
MATLGEAARAVLLTADPHAKRRAARGLARAWRRGELAHRCDVAMPDRPARPARPELLAPAQMPRRRKGGSERGRIAMLHA
LAHIEFVAIDLAVDLVGRFGGEFPRGFVDDWIGVAADEAMHFALLDRRLRQLGSFYGDLPAHAGLWEAAEATRDDALARL
AIVPMVLEARGLDVTPATVDRFRAAGDEVSAKILSRIYNDEIRHVRAGTVWFGQKCDELGFNAVETWHALVKSRFRGALK
PPFNDSARARAGLTQEYYAVIAS
>Mature_262_residues
ATLGEAARAVLLTADPHAKRRAARGLARAWRRGELAHRCDVAMPDRPARPARPELLAPAQMPRRRKGGSERGRIAMLHAL
AHIEFVAIDLAVDLVGRFGGEFPRGFVDDWIGVAADEAMHFALLDRRLRQLGSFYGDLPAHAGLWEAAEATRDDALARLA
IVPMVLEARGLDVTPATVDRFRAAGDEVSAKILSRIYNDEIRHVRAGTVWFGQKCDELGFNAVETWHALVKSRFRGALKP
PFNDSARARAGLTQEYYAVIAS

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 28964; Mature: 28832

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLGEAARAVLLTADPHAKRRAARGLARAWRRGELAHRCDVAMPDRPARPARPELLAPA
CCCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC
QMPRRRKGGSERGRIAMLHALAHIEFVAIDLAVDLVGRFGGEFPRGFVDDWIGVAADEAM
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
HFALLDRRLRQLGSFYGDLPAHAGLWEAAEATRDDALARLAIVPMVLEARGLDVTPATVD
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RFRAAGDEVSAKILSRIYNDEIRHVRAGTVWFGQKCDELGFNAVETWHALVKSRFRGALK
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCHHHHHHHHHHHHHHCCCCC
PPFNDSARARAGLTQEYYAVIAS
CCCCCCHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
ATLGEAARAVLLTADPHAKRRAARGLARAWRRGELAHRCDVAMPDRPARPARPELLAPA
CCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC
QMPRRRKGGSERGRIAMLHALAHIEFVAIDLAVDLVGRFGGEFPRGFVDDWIGVAADEAM
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
HFALLDRRLRQLGSFYGDLPAHAGLWEAAEATRDDALARLAIVPMVLEARGLDVTPATVD
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RFRAAGDEVSAKILSRIYNDEIRHVRAGTVWFGQKCDELGFNAVETWHALVKSRFRGALK
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCHHHHHHHHHHHHHHCCCCC
PPFNDSARARAGLTQEYYAVIAS
CCCCCCHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]