| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487655
Identifier: 103487655
GI number: 103487655
Start: 2284387
End: 2285361
Strand: Reverse
Name: 103487655
Synonym: Sala_2174
Alternate gene names: NA
Gene position: 2285361-2284387 (Counterclockwise)
Preceding gene: 103487656
Following gene: 103487654
Centisome position: 68.32
GC content: 64.92
Gene sequence:
>975_bases ATGGCCAGCGTCGCCCTCCTTTCGAATCCTCGCTCGACGGGCAATCGCTCGCAATTGCCGCGGGTTCGCGAGTTTTGCGC GGCGCACCCCGACATTTTTCACTATGAGGTGGAGGATGTCGAACAGATCGGCGAGGCGATCCGCACGATCGCGATGGTGT CCCCGCGCGTCGTCGCGATCAACGGCGGCGACGGCACGGTGCAGGCGGCGCTGACCGAGCTTTATTCGGGCGGCCATTTC GGCGGCTCGCCGCCACCGGTCGCGGTGCTGCCCAACGGCAAGACCAATTTGATCGCGTTCGACCTCGGCGCCGAGGGCGA TCCGATCAAGGCGCTCCAGCGCGTGCTCGACCTTGTCCAGGCGGGTGAGCTTGGCGAGCATGTGATCGAACGTCAGCTCA TCGCGCTCGACGGCGGCGGCAACACGCGGCCGGTGCTCGGCATGTTCCTTGGCGGCGCCTATCTCGCCGACGTCATGCTC TATTGCCGCAACCGCATCTATCCGCTCGGCCTGCCCAACGGTGTCTCGCATTTTCTTGCCGCGATTCTCGGGCTGTTCGC GATCATCTTTGGCATCGGCGGCGGGCGCTTGCCGCCCAAGCCCGAACCGATGACCGTGTCGCTCGTCCGCCAAGGCGAGT TCAAGGGCAAGTTCTCGCTGCTGATCGTCACGACGCTCGAAAAACTGCTGCTCAGCATCCGCACGAGCGACAGCCATGGC AGCAACGGCCATATGAAGCTGCTCGCGACCGACAGCAATGTCGGCGCATTGTTCCGGATGCTCGGTGCGACCTGGCGCGG CACGCTCGGGCAAAAGCAGCTCGCCGGCGTGCATTTCCAGCAGGGCGACGAGATACGGATCGAGGGAGCGCGGTCGAATG TGATCCTCGACGGCGAGATTTTCGAGGCCAGGAATGGCGCGCCGATCATCCTCACCTCGACGCAGCCGGTCCCCTTCCTG CGCCTCGCCGCATAG
Upstream 100 bases:
>100_bases ACATCTTCAACCTTGGCAAGCCGAGTTACAAGAAGACCGCCTTTTCGGTCGGCGATGCGCCGCGGACCATCTCTATCACG ATGAAATATATGTAACCCCG
Downstream 100 bases:
>100_bases GCTATGCCTCTTTGGCGTGATCCCGCTCGCTTCGAGCGAAGTCGAGATGCCCCGAAGAACAGCGCCGTTTCGAGGAGTGT CTCGACGTCGCTCGACGTCA
Product: diacylglycerol kinase, catalytic region
Products: NA
Alternate protein names: Sphingosine Kinase
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MASVALLSNPRSTGNRSQLPRVREFCAAHPDIFHYEVEDVEQIGEAIRTIAMVSPRVVAINGGDGTVQAALTELYSGGHF GGSPPPVAVLPNGKTNLIAFDLGAEGDPIKALQRVLDLVQAGELGEHVIERQLIALDGGGNTRPVLGMFLGGAYLADVML YCRNRIYPLGLPNGVSHFLAAILGLFAIIFGIGGGRLPPKPEPMTVSLVRQGEFKGKFSLLIVTTLEKLLLSIRTSDSHG SNGHMKLLATDSNVGALFRMLGATWRGTLGQKQLAGVHFQQGDEIRIEGARSNVILDGEIFEARNGAPIILTSTQPVPFL RLAA
Sequences:
>Translated_324_residues MASVALLSNPRSTGNRSQLPRVREFCAAHPDIFHYEVEDVEQIGEAIRTIAMVSPRVVAINGGDGTVQAALTELYSGGHF GGSPPPVAVLPNGKTNLIAFDLGAEGDPIKALQRVLDLVQAGELGEHVIERQLIALDGGGNTRPVLGMFLGGAYLADVML YCRNRIYPLGLPNGVSHFLAAILGLFAIIFGIGGGRLPPKPEPMTVSLVRQGEFKGKFSLLIVTTLEKLLLSIRTSDSHG SNGHMKLLATDSNVGALFRMLGATWRGTLGQKQLAGVHFQQGDEIRIEGARSNVILDGEIFEARNGAPIILTSTQPVPFL RLAA >Mature_323_residues ASVALLSNPRSTGNRSQLPRVREFCAAHPDIFHYEVEDVEQIGEAIRTIAMVSPRVVAINGGDGTVQAALTELYSGGHFG GSPPPVAVLPNGKTNLIAFDLGAEGDPIKALQRVLDLVQAGELGEHVIERQLIALDGGGNTRPVLGMFLGGAYLADVMLY CRNRIYPLGLPNGVSHFLAAILGLFAIIFGIGGGRLPPKPEPMTVSLVRQGEFKGKFSLLIVTTLEKLLLSIRTSDSHGS NGHMKLLATDSNVGALFRMLGATWRGTLGQKQLAGVHFQQGDEIRIEGARSNVILDGEIFEARNGAPIILTSTQPVPFLR LAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34529; Mature: 34398
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVALLSNPRSTGNRSQLPRVREFCAAHPDIFHYEVEDVEQIGEAIRTIAMVSPRVVAI CCCEEEECCCCCCCCHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEE NGGDGTVQAALTELYSGGHFGGSPPPVAVLPNGKTNLIAFDLGAEGDPIKALQRVLDLVQ ECCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHH AGELGEHVIERQLIALDGGGNTRPVLGMFLGGAYLADVMLYCRNRIYPLGLPNGVSHFLA CCHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHH AILGLFAIIFGIGGGRLPPKPEPMTVSLVRQGEFKGKFSLLIVTTLEKLLLSIRTSDSHG HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCC SNGHMKLLATDSNVGALFRMLGATWRGTLGQKQLAGVHFQQGDEIRIEGARSNVILDGEI CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCCEECCCCEEEEECCCCCEEECCEE FEARNGAPIILTSTQPVPFLRLAA EECCCCCEEEEECCCCCCEEEECC >Mature Secondary Structure ASVALLSNPRSTGNRSQLPRVREFCAAHPDIFHYEVEDVEQIGEAIRTIAMVSPRVVAI CCEEEECCCCCCCCHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEE NGGDGTVQAALTELYSGGHFGGSPPPVAVLPNGKTNLIAFDLGAEGDPIKALQRVLDLVQ ECCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHH AGELGEHVIERQLIALDGGGNTRPVLGMFLGGAYLADVMLYCRNRIYPLGLPNGVSHFLA CCHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHH AILGLFAIIFGIGGGRLPPKPEPMTVSLVRQGEFKGKFSLLIVTTLEKLLLSIRTSDSHG HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCC SNGHMKLLATDSNVGALFRMLGATWRGTLGQKQLAGVHFQQGDEIRIEGARSNVILDGEI CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCCEECCCCEEEEECCCCCEEECCEE FEARNGAPIILTSTQPVPFLRLAA EECCCCCEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA