| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mgtA [H]
Identifier: 103487638
GI number: 103487638
Start: 2267982
End: 2269139
Strand: Reverse
Name: mgtA [H]
Synonym: Sala_2157
Alternate gene names: 103487638
Gene position: 2269139-2267982 (Counterclockwise)
Preceding gene: 103487639
Following gene: 103487637
Centisome position: 67.83
GC content: 65.54
Gene sequence:
>1158_bases ATGGACGTTTCGGACCTTCGCATCGCCCTGTTCAGCGGCAATTACAACATGACGACCGACGGCGCGAACAAGGCGCTCAA TCGCCTCGTCGGATATCTGCTGGCGCAGGGCGCGGCGGTGCGCGTCTATTCGCCGACCGTCGCCCACCCCGACTTCGAAC CCACCGGCGACCTCGTCAGCGTGCCGTCGATGGCGATCCCCGGGCGCAGCGAATATCGCATACCCTTGAGCTTTTCATCG AGGGTGCGCCAGGACATCGCCACCTTTGCGCCCAACATCGTCCATATCTCCAGCCCCGATCGCGTGGCGCGACAGGCGGC GGCGTGGGCGCGGCGGCGCCGGATTCCGGTGGCCTGTTCGGTCCATACGCGCTTCGAAACCTATTTCCGCTATTATAATC TGTCGTTCCTCGAACCGCTCGTGGTCGCCTGGCTGCGCAAACTCTATCGCCGCTGCGACGCGCTGATCGCGCCGTCCGAA AGCTTTGCGCAGGTGCTCCGCGACCAGCGGATGAATTATGACATCGGCATCTGGACGCGCGGCGTCGAACAGGGGATTTT TCACCCCGGCCGCCGCGACATGGCCTGGCGCCGGTCGCTCGGCATCGCCGACGACACGCCCACTATCGCCTTCCTCGGGC GGCTGGTGATGGAAAAGGGGCTCGACGTCTTTGCCGATGCCATCGACGTGCTGACGCGCCGCGGCGTGCCGCATCAGGTG GTGGTGATCGGCGAGGGGCCGGCGGGCGACTGGTTCGAATCGCGCCTGCCCAACGCGCATTTCGTGGGCTTTCAGGGCGG CGCCGATCTCGCTCATGCGCTTGCGTCGTGCGACATCTTCTTCAACCCGTCGGTCACCGAAACCTTTGGCAATGTCACGC TCGAGGCCATGGCGTGCGGGCTGCCGGTGGTGGCGGCGCGCGCGACGGGCAGCGCGAGTATCGTCAAGCATGGCCAGACG GGCTATCTCGTCGCACCGGGATCGATCTCGGGCTTTGCCGACCATCTCGAGCGTTATTGCAACGATACCGCGCTGCGCGC CGACCATGGCGCCGCGGCGGTGCGCGAAAGCGGCGCCTATCAGTGGGATGCGATCAATCAGGCGGTTGCCGACACCTATT TGCGCCTGATCCGCCAGAAACAGCGGCACGGGGGCTGA
Upstream 100 bases:
>100_bases TGCATCCGCCGATCGACCTTGATCCCGAAGCGCCATCGGAGCAGCGCGAGGCTTTCTGACGCAATTGCCTTTGCCCGGCT AACGGATTAGGCGAGGCGGG
Downstream 100 bases:
>100_bases GCGCCCGATGGCGGGCGATCTCTTCGGTGAGGAAACACCGACCGCGCGGCAGGACGCGGCGACCGGCGCCGCGCCGCTCG CTGAGCGGCTGCGGCCGCGC
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVSVPSMAIPGRSEYRIPLSFSS RVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACSVHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSE SFAQVLRDQRMNYDIGIWTRGVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACGLPVVAARATGSASIVKHGQT GYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAYQWDAINQAVADTYLRLIRQKQRHGG
Sequences:
>Translated_385_residues MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVSVPSMAIPGRSEYRIPLSFSS RVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACSVHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSE SFAQVLRDQRMNYDIGIWTRGVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACGLPVVAARATGSASIVKHGQT GYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAYQWDAINQAVADTYLRLIRQKQRHGG >Mature_385_residues MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVSVPSMAIPGRSEYRIPLSFSS RVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACSVHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSE SFAQVLRDQRMNYDIGIWTRGVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACGLPVVAARATGSASIVKHGQT GYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAYQWDAINQAVADTYLRLIRQKQRHGG
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42354; Mature: 42354
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVS CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE VPSMAIPGRSEYRIPLSFSSRVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACS CCCEECCCCCCEEEECCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCEEEE VHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSESFAQVLRDQRMNYDIGIWTR EHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC GVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV CHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEE VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACG EEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC LPVVAARATGSASIVKHGQTGYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAY CCEEEECCCCCHHHEECCCCCEEECCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHCCCC QWDAINQAVADTYLRLIRQKQRHGG CHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVS CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE VPSMAIPGRSEYRIPLSFSSRVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACS CCCEECCCCCCEEEECCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCEEEE VHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSESFAQVLRDQRMNYDIGIWTR EHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC GVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV CHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEE VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACG EEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC LPVVAARATGSASIVKHGQTGYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAY CCEEEECCCCCHHHEECCCCCEEECCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHCCCC QWDAINQAVADTYLRLIRQKQRHGG CHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]