Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is mgtA [H]

Identifier: 103487638

GI number: 103487638

Start: 2267982

End: 2269139

Strand: Reverse

Name: mgtA [H]

Synonym: Sala_2157

Alternate gene names: 103487638

Gene position: 2269139-2267982 (Counterclockwise)

Preceding gene: 103487639

Following gene: 103487637

Centisome position: 67.83

GC content: 65.54

Gene sequence:

>1158_bases
ATGGACGTTTCGGACCTTCGCATCGCCCTGTTCAGCGGCAATTACAACATGACGACCGACGGCGCGAACAAGGCGCTCAA
TCGCCTCGTCGGATATCTGCTGGCGCAGGGCGCGGCGGTGCGCGTCTATTCGCCGACCGTCGCCCACCCCGACTTCGAAC
CCACCGGCGACCTCGTCAGCGTGCCGTCGATGGCGATCCCCGGGCGCAGCGAATATCGCATACCCTTGAGCTTTTCATCG
AGGGTGCGCCAGGACATCGCCACCTTTGCGCCCAACATCGTCCATATCTCCAGCCCCGATCGCGTGGCGCGACAGGCGGC
GGCGTGGGCGCGGCGGCGCCGGATTCCGGTGGCCTGTTCGGTCCATACGCGCTTCGAAACCTATTTCCGCTATTATAATC
TGTCGTTCCTCGAACCGCTCGTGGTCGCCTGGCTGCGCAAACTCTATCGCCGCTGCGACGCGCTGATCGCGCCGTCCGAA
AGCTTTGCGCAGGTGCTCCGCGACCAGCGGATGAATTATGACATCGGCATCTGGACGCGCGGCGTCGAACAGGGGATTTT
TCACCCCGGCCGCCGCGACATGGCCTGGCGCCGGTCGCTCGGCATCGCCGACGACACGCCCACTATCGCCTTCCTCGGGC
GGCTGGTGATGGAAAAGGGGCTCGACGTCTTTGCCGATGCCATCGACGTGCTGACGCGCCGCGGCGTGCCGCATCAGGTG
GTGGTGATCGGCGAGGGGCCGGCGGGCGACTGGTTCGAATCGCGCCTGCCCAACGCGCATTTCGTGGGCTTTCAGGGCGG
CGCCGATCTCGCTCATGCGCTTGCGTCGTGCGACATCTTCTTCAACCCGTCGGTCACCGAAACCTTTGGCAATGTCACGC
TCGAGGCCATGGCGTGCGGGCTGCCGGTGGTGGCGGCGCGCGCGACGGGCAGCGCGAGTATCGTCAAGCATGGCCAGACG
GGCTATCTCGTCGCACCGGGATCGATCTCGGGCTTTGCCGACCATCTCGAGCGTTATTGCAACGATACCGCGCTGCGCGC
CGACCATGGCGCCGCGGCGGTGCGCGAAAGCGGCGCCTATCAGTGGGATGCGATCAATCAGGCGGTTGCCGACACCTATT
TGCGCCTGATCCGCCAGAAACAGCGGCACGGGGGCTGA

Upstream 100 bases:

>100_bases
TGCATCCGCCGATCGACCTTGATCCCGAAGCGCCATCGGAGCAGCGCGAGGCTTTCTGACGCAATTGCCTTTGCCCGGCT
AACGGATTAGGCGAGGCGGG

Downstream 100 bases:

>100_bases
GCGCCCGATGGCGGGCGATCTCTTCGGTGAGGAAACACCGACCGCGCGGCAGGACGCGGCGACCGGCGCCGCGCCGCTCG
CTGAGCGGCTGCGGCCGCGC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVSVPSMAIPGRSEYRIPLSFSS
RVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACSVHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSE
SFAQVLRDQRMNYDIGIWTRGVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV
VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACGLPVVAARATGSASIVKHGQT
GYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAYQWDAINQAVADTYLRLIRQKQRHGG

Sequences:

>Translated_385_residues
MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVSVPSMAIPGRSEYRIPLSFSS
RVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACSVHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSE
SFAQVLRDQRMNYDIGIWTRGVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV
VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACGLPVVAARATGSASIVKHGQT
GYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAYQWDAINQAVADTYLRLIRQKQRHGG
>Mature_385_residues
MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVSVPSMAIPGRSEYRIPLSFSS
RVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACSVHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSE
SFAQVLRDQRMNYDIGIWTRGVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV
VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACGLPVVAARATGSASIVKHGQT
GYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAYQWDAINQAVADTYLRLIRQKQRHGG

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42354; Mature: 42354

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVS
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE
VPSMAIPGRSEYRIPLSFSSRVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACS
CCCEECCCCCCEEEECCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCEEEE
VHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSESFAQVLRDQRMNYDIGIWTR
EHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC
GVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV
CHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEE
VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACG
EEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC
LPVVAARATGSASIVKHGQTGYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAY
CCEEEECCCCCHHHEECCCCCEEECCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHCCCC
QWDAINQAVADTYLRLIRQKQRHGG
CHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVSDLRIALFSGNYNMTTDGANKALNRLVGYLLAQGAAVRVYSPTVAHPDFEPTGDLVS
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE
VPSMAIPGRSEYRIPLSFSSRVRQDIATFAPNIVHISSPDRVARQAAAWARRRRIPVACS
CCCEECCCCCCEEEECCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCEEEE
VHTRFETYFRYYNLSFLEPLVVAWLRKLYRRCDALIAPSESFAQVLRDQRMNYDIGIWTR
EHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC
GVEQGIFHPGRRDMAWRRSLGIADDTPTIAFLGRLVMEKGLDVFADAIDVLTRRGVPHQV
CHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEE
VVIGEGPAGDWFESRLPNAHFVGFQGGADLAHALASCDIFFNPSVTETFGNVTLEAMACG
EEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC
LPVVAARATGSASIVKHGQTGYLVAPGSISGFADHLERYCNDTALRADHGAAAVRESGAY
CCEEEECCCCCHHHEECCCCCEEECCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHCCCC
QWDAINQAVADTYLRLIRQKQRHGG
CHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]