Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487593

Identifier: 103487593

GI number: 103487593

Start: 2220222

End: 2220806

Strand: Reverse

Name: 103487593

Synonym: Sala_2112

Alternate gene names: NA

Gene position: 2220806-2220222 (Counterclockwise)

Preceding gene: 103487594

Following gene: 103487592

Centisome position: 66.39

GC content: 67.52

Gene sequence:

>585_bases
ATGATCGGCCCGTCACCTTCGCTTTCCAGCGACTTTGCACAGCTTTCGCTCGCCGAAGTTGCCGAGCGGTTCGCGGCGCA
GACGCTGCCGCCGGTCGAAAGCTGGCATCCCGAACGCAGCGGCGACAGCGCGATGGAGATCCGCGCCGACGGCAGCTGGT
ATCACGAGGGCGGACGGATCAACCGGCCGGCGATGGTCAGGCTTTTCTCGACGATTCTGCGGCGCGAGGCCGACGGCAGC
CACGTCCTCGTCACCCCGGCCGAAAAGCTCGCCATCGCGGTCGAGGACACGCCCTTTCGCGCGGTCGAGATGAAGAGCGA
AGGCGAGGGGGCGGCGCGCAAACTCGTCTTTCGCCTCGACACCGACGACCTCGTGCTTGCGGGCCCGGACCATCCGCTGT
CCTTCGGCAGCGACCCCGACCGCCCCGACCCGCGGCTGCATGTGCGCGGCACCATCGGCAACGGGCTCGAGGCGCGCATC
GACCGCGCGCTTTATTACGAAATCGTCGAGATGGCGCTCGCCGGGGGTGACGATCCGCCCGTGATATGGTCGAATGGCGC
GCAATTTCCCCTGGTCGATCGCTGA

Upstream 100 bases:

>100_bases
GGCTATGATCCGCCGGTCGGCGCGGGCATGATCGGGCCGCGCTGACCCATCGGGCAGCTGTGAGGGTTGCGCGACGCGCC
CGGCCCCCTATGTCGGAGGC

Downstream 100 bases:

>100_bases
TGCTGTCGGCCAAATTGCGCGACGCGCTCGCCAATCTGCTGCCCGAACCGGGTGAGGACGAGGCCTATCTGGGCACGCCG
ACGTTGCGCGATGCCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIGPSPSLSSDFAQLSLAEVAERFAAQTLPPVESWHPERSGDSAMEIRADGSWYHEGGRINRPAMVRLFSTILRREADGS
HVLVTPAEKLAIAVEDTPFRAVEMKSEGEGAARKLVFRLDTDDLVLAGPDHPLSFGSDPDRPDPRLHVRGTIGNGLEARI
DRALYYEIVEMALAGGDDPPVIWSNGAQFPLVDR

Sequences:

>Translated_194_residues
MIGPSPSLSSDFAQLSLAEVAERFAAQTLPPVESWHPERSGDSAMEIRADGSWYHEGGRINRPAMVRLFSTILRREADGS
HVLVTPAEKLAIAVEDTPFRAVEMKSEGEGAARKLVFRLDTDDLVLAGPDHPLSFGSDPDRPDPRLHVRGTIGNGLEARI
DRALYYEIVEMALAGGDDPPVIWSNGAQFPLVDR
>Mature_194_residues
MIGPSPSLSSDFAQLSLAEVAERFAAQTLPPVESWHPERSGDSAMEIRADGSWYHEGGRINRPAMVRLFSTILRREADGS
HVLVTPAEKLAIAVEDTPFRAVEMKSEGEGAARKLVFRLDTDDLVLAGPDHPLSFGSDPDRPDPRLHVRGTIGNGLEARI
DRALYYEIVEMALAGGDDPPVIWSNGAQFPLVDR

Specific function: Unknown

COG id: COG3816

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21199; Mature: 21199

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGPSPSLSSDFAQLSLAEVAERFAAQTLPPVESWHPERSGDSAMEIRADGSWYHEGGRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCEEECCCCC
NRPAMVRLFSTILRREADGSHVLVTPAEKLAIAVEDTPFRAVEMKSEGEGAARKLVFRLD
CCHHHHHHHHHHHHCCCCCCEEEEECHHHEEEEECCCCCEEEEECCCCCCCEEEEEEEEC
TDDLVLAGPDHPLSFGSDPDRPDPRLHVRGTIGNGLEARIDRALYYEIVEMALAGGDDPP
CCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VIWSNGAQFPLVDR
EEECCCCCCCCCCC
>Mature Secondary Structure
MIGPSPSLSSDFAQLSLAEVAERFAAQTLPPVESWHPERSGDSAMEIRADGSWYHEGGRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCEEECCCCC
NRPAMVRLFSTILRREADGSHVLVTPAEKLAIAVEDTPFRAVEMKSEGEGAARKLVFRLD
CCHHHHHHHHHHHHCCCCCCEEEEECHHHEEEEECCCCCEEEEECCCCCCCEEEEEEEEC
TDDLVLAGPDHPLSFGSDPDRPDPRLHVRGTIGNGLEARIDRALYYEIVEMALAGGDDPP
CCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VIWSNGAQFPLVDR
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA