| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487594
Identifier: 103487594
GI number: 103487594
Start: 2220862
End: 2221365
Strand: Reverse
Name: 103487594
Synonym: Sala_2113
Alternate gene names: NA
Gene position: 2221365-2220862 (Counterclockwise)
Preceding gene: 103487597
Following gene: 103487593
Centisome position: 66.41
GC content: 69.05
Gene sequence:
>504_bases TTGGTCGAGTTACTTCCATTGTCGAACATCGAACCGGCGGCGGTCGAGGATCTGCTCGACGCGGCGTTCGGCGCCGACCG CTTTGAACGCATCGCCTATCGCATCCGCAACGGCATGAAAGCGGTGCCTGCGCTCAGCTTTGCGGCGGTCGAAAAGGGGG CGCTCGTTGGCGCGATCCAGTGCTGGCCGGTCGCGCACCGCGCTGCCGACGGCACGGCGACGCCGCTCGTCATGGTCGGC CCCGTCGCGGTGCGCCCCGACGTCCAGCGCGGCGGGTACGGCCGCGCGCTGATGGCGCAGATGCTCGCCGCCGCCGAAAC TGCGGCCGACGGTGCGCTGATGATGATCGGCGATCCCGAATATTATGGCCGCTTCTTCGGCTTTACGGTCGATGCCACGG GCGAATGGGATCTGCCGGGACCGTTCGAGCGGCGGCGCCTGCTTGCGCGCCCGGTGAACGGCTATGATCCGCCGGTCGGC GCGGGCATGATCGGGCCGCGCTGA
Upstream 100 bases:
>100_bases TATCGGTCACAAGATATTCCTGTCCACCGGGTGCGACATTCGGCTTTGCATCGCCACCCCGCACCCCTAAAGCGCCGCCG CATTAGCGAAAGGGTGCGCG
Downstream 100 bases:
>100_bases CCCATCGGGCAGCTGTGAGGGTTGCGCGACGCGCCCGGCCCCCTATGTCGGAGGCATGATCGGCCCGTCACCTTCGCTTT CCAGCGACTTTGCACAGCTT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Acetyltransferase Family Protein; Gcn5-Related N-Acetyltransferase; Acetyltransferase-Like
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MVELLPLSNIEPAAVEDLLDAAFGADRFERIAYRIRNGMKAVPALSFAAVEKGALVGAIQCWPVAHRAADGTATPLVMVG PVAVRPDVQRGGYGRALMAQMLAAAETAADGALMMIGDPEYYGRFFGFTVDATGEWDLPGPFERRRLLARPVNGYDPPVG AGMIGPR
Sequences:
>Translated_167_residues MVELLPLSNIEPAAVEDLLDAAFGADRFERIAYRIRNGMKAVPALSFAAVEKGALVGAIQCWPVAHRAADGTATPLVMVG PVAVRPDVQRGGYGRALMAQMLAAAETAADGALMMIGDPEYYGRFFGFTVDATGEWDLPGPFERRRLLARPVNGYDPPVG AGMIGPR >Mature_167_residues MVELLPLSNIEPAAVEDLLDAAFGADRFERIAYRIRNGMKAVPALSFAAVEKGALVGAIQCWPVAHRAADGTATPLVMVG PVAVRPDVQRGGYGRALMAQMLAAAETAADGALMMIGDPEYYGRFFGFTVDATGEWDLPGPFERRRLLARPVNGYDPPVG AGMIGPR
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17774; Mature: 17774
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELLPLSNIEPAAVEDLLDAAFGADRFERIAYRIRNGMKAVPALSFAAVEKGALVGAIQ CEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCEEEEEE CWPVAHRAADGTATPLVMVGPVAVRPDVQRGGYGRALMAQMLAAAETAADGALMMIGDPE CCCHHHHCCCCCCCCEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHH YYGRFFGFTVDATGEWDLPGPFERRRLLARPVNGYDPPVGAGMIGPR HHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVELLPLSNIEPAAVEDLLDAAFGADRFERIAYRIRNGMKAVPALSFAAVEKGALVGAIQ CEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCEEEEEE CWPVAHRAADGTATPLVMVGPVAVRPDVQRGGYGRALMAQMLAAAETAADGALMMIGDPE CCCHHHHCCCCCCCCEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHH YYGRFFGFTVDATGEWDLPGPFERRRLLARPVNGYDPPVGAGMIGPR HHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA