Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487488

Identifier: 103487488

GI number: 103487488

Start: 2114432

End: 2114932

Strand: Reverse

Name: 103487488

Synonym: Sala_2005

Alternate gene names: NA

Gene position: 2114932-2114432 (Counterclockwise)

Preceding gene: 103487489

Following gene: 103487487

Centisome position: 63.22

GC content: 69.86

Gene sequence:

>501_bases
ATGGGACGGATCGGCAAGGTCGGGGAGGGCCATGGAGGAAATGCGGGCGGCAGGGCGCGTCCCGGCCGCGCACAGATGGA
CATTTTTCTGGAGGCGCTCGCCGAATCGTCAAATGTGGCCGCATCGGCGCGCAAGGCCGGAATCGGCGCCGATGCCATGT
ATCGCGAACGGCGGCGCAACAGCGGCTTTGCCGCGCGCTGGCAAGCGGCGCTGTGCGAAGGCTTTGCCCGGCTCGAAGCC
GAACTGCTGGCCGAGGCGCTGATCGCGCCGACGGGCAATGTGAAGGATGCGACGCTGAAATCGCGGGCCCAGAAATACCG
GCTCGGCCTTTCGTTGCTCGCGGCGCATCGCGCGGCGGTGCGCGGGGCCAAGCTGCCCGGCGTCGGCCCCGCCGCGGCAC
AAGGGAGCGCCAAGGCGCGACTGACCGCGAAGCTCCATGCGATGCAGGCGCAGGCCGCGGCCGAGACCGATCTGCTCGCC
GATCAGGGCGAGCGCGAATGA

Upstream 100 bases:

>100_bases
GTCACGCTGATGTGGCACACGAGTCACATCATGAAGAATTGCGAGTCGGGCCGGCGCCTTTCGGGGCGGTCGGCCCGATC
TGTTTTCCGGGGAGGCGGCG

Downstream 100 bases:

>100_bases
AGCACGCAACCGACTGCGTCGGCGAAACGCGGACGAAACTCGATCGCTGGTTGAAGGCGCTGTCGGACAGGAAATGCGCG
CAGCTGCTGACCGACTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGRIGKVGEGHGGNAGGRARPGRAQMDIFLEALAESSNVAASARKAGIGADAMYRERRRNSGFAARWQAALCEGFARLEA
ELLAEALIAPTGNVKDATLKSRAQKYRLGLSLLAAHRAAVRGAKLPGVGPAAAQGSAKARLTAKLHAMQAQAAAETDLLA
DQGERE

Sequences:

>Translated_166_residues
MGRIGKVGEGHGGNAGGRARPGRAQMDIFLEALAESSNVAASARKAGIGADAMYRERRRNSGFAARWQAALCEGFARLEA
ELLAEALIAPTGNVKDATLKSRAQKYRLGLSLLAAHRAAVRGAKLPGVGPAAAQGSAKARLTAKLHAMQAQAAAETDLLA
DQGERE
>Mature_165_residues
GRIGKVGEGHGGNAGGRARPGRAQMDIFLEALAESSNVAASARKAGIGADAMYRERRRNSGFAARWQAALCEGFARLEAE
LLAEALIAPTGNVKDATLKSRAQKYRLGLSLLAAHRAAVRGAKLPGVGPAAAQGSAKARLTAKLHAMQAQAAAETDLLAD
QGERE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17229; Mature: 17098

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIGKVGEGHGGNAGGRARPGRAQMDIFLEALAESSNVAASARKAGIGADAMYRERRRN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHC
SGFAARWQAALCEGFARLEAELLAEALIAPTGNVKDATLKSRAQKYRLGLSLLAAHRAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGAKLPGVGPAAAQGSAKARLTAKLHAMQAQAAAETDLLADQGERE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GRIGKVGEGHGGNAGGRARPGRAQMDIFLEALAESSNVAASARKAGIGADAMYRERRRN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHC
SGFAARWQAALCEGFARLEAELLAEALIAPTGNVKDATLKSRAQKYRLGLSLLAAHRAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGAKLPGVGPAAAQGSAKARLTAKLHAMQAQAAAETDLLADQGERE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA