| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487456
Identifier: 103487456
GI number: 103487456
Start: 2080429
End: 2080683
Strand: Reverse
Name: 103487456
Synonym: Sala_1972
Alternate gene names: NA
Gene position: 2080683-2080429 (Counterclockwise)
Preceding gene: 103487457
Following gene: 103487455
Centisome position: 62.2
GC content: 70.2
Gene sequence:
>255_bases GTGTACCGCTTTGAAATCGACGCGACGCCCGACCCGCAGGCGCTGCCGCGCGTTGCCAATGTTTTCGCGCAGCGCGCGCT CGTGCCCGCCGCGATCACGATGAACCTCCTGCCGACGCATATAGCCATCGAGGTCGTCGTCGCCGGTCTGGACGGCGCGC AGGCCGCCGTCATCGCCGCCAAGCTCGGCGAGGGTGTTGCGGTCCTGCGATCCGAAGCGGCGGCCGTCGATCCACCGCTC CGCCTCGCGGGCTGA
Upstream 100 bases:
>100_bases GCGCGGCGCGCGAGGGACGCTCCCCTGCATTCGTCGCCGACGAAATGGCCGAAGAGGTGATCGCGGGCGCCAAGCGCGTG GCGGCCTGAGGGCCCGCGCC
Downstream 100 bases:
>100_bases TCACGGCGCGTTCAACTTTTTCTTTCGCCGGAAGGAGGCGAGGGCGGCTTGCCCCGCCCGGCCGCGTGTGTAACGGCCGC GCTGACGAATGGCGGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAAKLGEGVAVLRSEAAAVDPPL RLAG
Sequences:
>Translated_84_residues MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAAKLGEGVAVLRSEAAAVDPPL RLAG >Mature_84_residues MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAAKLGEGVAVLRSEAAAVDPPL RLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8655; Mature: 8655
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAA CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEEEEEEECCCCCHHHHHHH KLGEGVAVLRSEAAAVDPPLRLAG HHCCCCEEHHCCCCCCCCCCCCCC >Mature Secondary Structure MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAA CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEEEEEEECCCCCHHHHHHH KLGEGVAVLRSEAAAVDPPLRLAG HHCCCCEEHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA