Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487406

Identifier: 103487406

GI number: 103487406

Start: 2026032

End: 2027099

Strand: Reverse

Name: 103487406

Synonym: Sala_1922

Alternate gene names: NA

Gene position: 2027099-2026032 (Counterclockwise)

Preceding gene: 103487407

Following gene: 103487405

Centisome position: 60.6

GC content: 68.35

Gene sequence:

>1068_bases
GTGAATGCGCTCGCCGACCCGGCGATGAAGGCGTTCGCTGGCACACCGCTGTCCGACGCGGCCGAATGGGACGCCTATGT
CGCGGCCCATCCGCAGGCGACACCGTTCCACAGCCGAGCGTGGTGTGAGGCGATCACCAGGGCGACCGGGCATCGATGCC
ATCTGGTGACCGCGCGCGATGCGCGCGGCGGCCTGACCGGGCTGCTGCCGCTGCACCACATCCGCTCGCCACTGTTCGGG
CAGGCGCTCGTCGGTAGCGGCTTTGCCGTCGGCGGCGGCATCTTGGCCGACGATCGCGCCGTGGCCGCGACGCTGGCAAG
CGGCGCGGCGGAGATGGCGCGGGCACTCGGCGTGCCGTCGGTCGAACTACGCGGCGGCCCGCTGCCCGAAGGCGAGGGCT
GGATGCGCGACGAGGGCGTCTATGCGGGCTTTGCGCGCGACCTCGCCGGTGATGACGACGCCGAACTGCTCGCCATCCCG
CGCAAGCAGCGCGCCGAGGTGCGCAAGGCGCGGGCGAGCGCGCTGACCGTTACCATCGGGCGTGACGATGCTGAACGGGA
CGATCATTATCGCGTTTACGCCACCAGCGTCCGCAATCTTGGCACGCCCGTTTTTCCCAAGAGCCTGTTCGATGCGGTGC
TCGACGCCTTTGGCGAGGGTGCCGACATATTGACCGTGCGCGACGGCGGACGGCCGATAGCCAGTGTGCTCAGTCTTTAT
TGGCGCGGCGTGGTGATGCCCTATTGGGGCGGTGGGCTCGCCGACGCGCGGCGCCTCCGTGCCAATGAGTTGATGTATTT
CGCTTTGATGAGTCACGCTCGGGCGAGGCAGTGCATCGCTTTCGATTTCGGGCGGTCGAAGGTCGGCACCGGTCCCTGTT
ACTACAAGAAGAATTGGGGTTTCGAGCCGCAGCCGCTCGCCTATGCGCGCTGGCTCGCGCCGGGGCGGCGCGCGCGCGAT
ACCAATCCGAACAGCGCGAAATACCGGATGCAGGTCGATCTGTGGAAGCGGCTGCCGCTGTGGGCGGCGAACCGCATCGG
CCCGCTGATCGCGCGCGGATTGGGGTGA

Upstream 100 bases:

>100_bases
CGGGCAAGCTGAAGAAACTGCTCGCCGATTTCGACTGGACGCGCGCCGACGCGCTGCTGCCCGCGCAGCAGCAGCGCGCT
GCGCCTTGGCAGGCCGCGGC

Downstream 100 bases:

>100_bases
ACGGGCGTGGCCAATATCCCCTCGTCATTGCGAGCCGCAGGCGAAGCAATCTCCAGAAGGCGGCCTTGTGCGCGGTCGAT
GGCTGGAGATTGCCGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNALADPAMKAFAGTPLSDAAEWDAYVAAHPQATPFHSRAWCEAITRATGHRCHLVTARDARGGLTGLLPLHHIRSPLFG
QALVGSGFAVGGGILADDRAVAATLASGAAEMARALGVPSVELRGGPLPEGEGWMRDEGVYAGFARDLAGDDDAELLAIP
RKQRAEVRKARASALTVTIGRDDAERDDHYRVYATSVRNLGTPVFPKSLFDAVLDAFGEGADILTVRDGGRPIASVLSLY
WRGVVMPYWGGGLADARRLRANELMYFALMSHARARQCIAFDFGRSKVGTGPCYYKKNWGFEPQPLAYARWLAPGRRARD
TNPNSAKYRMQVDLWKRLPLWAANRIGPLIARGLG

Sequences:

>Translated_355_residues
MNALADPAMKAFAGTPLSDAAEWDAYVAAHPQATPFHSRAWCEAITRATGHRCHLVTARDARGGLTGLLPLHHIRSPLFG
QALVGSGFAVGGGILADDRAVAATLASGAAEMARALGVPSVELRGGPLPEGEGWMRDEGVYAGFARDLAGDDDAELLAIP
RKQRAEVRKARASALTVTIGRDDAERDDHYRVYATSVRNLGTPVFPKSLFDAVLDAFGEGADILTVRDGGRPIASVLSLY
WRGVVMPYWGGGLADARRLRANELMYFALMSHARARQCIAFDFGRSKVGTGPCYYKKNWGFEPQPLAYARWLAPGRRARD
TNPNSAKYRMQVDLWKRLPLWAANRIGPLIARGLG
>Mature_355_residues
MNALADPAMKAFAGTPLSDAAEWDAYVAAHPQATPFHSRAWCEAITRATGHRCHLVTARDARGGLTGLLPLHHIRSPLFG
QALVGSGFAVGGGILADDRAVAATLASGAAEMARALGVPSVELRGGPLPEGEGWMRDEGVYAGFARDLAGDDDAELLAIP
RKQRAEVRKARASALTVTIGRDDAERDDHYRVYATSVRNLGTPVFPKSLFDAVLDAFGEGADILTVRDGGRPIASVLSLY
WRGVVMPYWGGGLADARRLRANELMYFALMSHARARQCIAFDFGRSKVGTGPCYYKKNWGFEPQPLAYARWLAPGRRARD
TNPNSAKYRMQVDLWKRLPLWAANRIGPLIARGLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38452; Mature: 38452

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALADPAMKAFAGTPLSDAAEWDAYVAAHPQATPFHSRAWCEAITRATGHRCHLVTARD
CCCCHHHHHHHHCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECC
ARGGLTGLLPLHHIRSPLFGQALVGSGFAVGGGILADDRAVAATLASGAAEMARALGVPS
CCCCCCHHHHHHHHCCCHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHHHHHHHHCCCC
VELRGGPLPEGEGWMRDEGVYAGFARDLAGDDDAELLAIPRKQRAEVRKARASALTVTIG
EEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCEEEEEEC
RDDAERDDHYRVYATSVRNLGTPVFPKSLFDAVLDAFGEGADILTVRDGGRPIASVLSLY
CCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
WRGVVMPYWGGGLADARRLRANELMYFALMSHARARQCIAFDFGRSKVGTGPCYYKKNWG
HCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEECCCCC
FEPQPLAYARWLAPGRRARDTNPNSAKYRMQVDLWKRLPLWAANRIGPLIARGLG
CCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNALADPAMKAFAGTPLSDAAEWDAYVAAHPQATPFHSRAWCEAITRATGHRCHLVTARD
CCCCHHHHHHHHCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECC
ARGGLTGLLPLHHIRSPLFGQALVGSGFAVGGGILADDRAVAATLASGAAEMARALGVPS
CCCCCCHHHHHHHHCCCHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHHHHHHHHCCCC
VELRGGPLPEGEGWMRDEGVYAGFARDLAGDDDAELLAIPRKQRAEVRKARASALTVTIG
EEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCEEEEEEC
RDDAERDDHYRVYATSVRNLGTPVFPKSLFDAVLDAFGEGADILTVRDGGRPIASVLSLY
CCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
WRGVVMPYWGGGLADARRLRANELMYFALMSHARARQCIAFDFGRSKVGTGPCYYKKNWG
HCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEECCCCC
FEPQPLAYARWLAPGRRARDTNPNSAKYRMQVDLWKRLPLWAANRIGPLIARGLG
CCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA