Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487372

Identifier: 103487372

GI number: 103487372

Start: 1988178

End: 1988771

Strand: Reverse

Name: 103487372

Synonym: Sala_1888

Alternate gene names: NA

Gene position: 1988771-1988178 (Counterclockwise)

Preceding gene: 103487373

Following gene: 103487371

Centisome position: 59.45

GC content: 69.02

Gene sequence:

>594_bases
ATGGCGGCCCGCAAGCTGCAGGGGATCGGTCTGGTCCTGCTGGTGCTCCTCTTTGCGATGATGCTTTATCCCGTGTCGCT
CAAGGTTGCGGCGACGCGCAGCGAACTCACGCGCGTCGAGCGCGAGATCGACCGCGCGCGCGACAATATCCGCTACCTTG
AATCCGAACTCGCGGTGCGCGCATCGATGCGCCAGCTCGAACAGTGGAATGCCGAGGCCTTTGGCTATTCGGCGCCCGAT
GCCGGGCAATATCTGGCGAGCGAGCGCCAGCTCGCCTCGCTTGACCGCCTGCCGCGGGCGCGCGGCGCGAACGAGGTCGC
ACCGGTGCTGATGGCGATGGTCTCACCCGTCGCGGTGCCCGCCGCGCCCAAGGCCAGCCCGGTTGCCGACAAACCCGCGG
TCGCCGCGGCCAAGCCCGTCGTGCTGGCGCAGGTCGACAGCGGCGTTCGCAGCGACGCGCTGCCGCGGATGGCGCCGACG
CGCCGCCGCGAGCAATTGAAGATGATCGAGGACCAGCTGCTCGCCGAATCGACGCTCGCCGATTTGAAGCGCGACGCGGC
GATCGAAGCGGCAGGAGGCAAGCCCGCCCGATGA

Upstream 100 bases:

>100_bases
CGCGCAATCCGCGCGCGCGCTCGGCGACGCTGCGCAGCGCCGTGCGCACCGCGGCGCCGGCCTGGCCGGGCAATTCGATG
AAGGAGGCAATGTCATGCTG

Downstream 100 bases:

>100_bases
ACACGCTGGTCGTCCGTCCGACCCGGGTGCGTACCGCCGGTGTGCGGCAGCAGATCCTGCTGACCGCGCAACAGCGTTTG
ATGATCCTCATGCTGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAARKLQGIGLVLLVLLFAMMLYPVSLKVAATRSELTRVEREIDRARDNIRYLESELAVRASMRQLEQWNAEAFGYSAPD
AGQYLASERQLASLDRLPRARGANEVAPVLMAMVSPVAVPAAPKASPVADKPAVAAAKPVVLAQVDSGVRSDALPRMAPT
RRREQLKMIEDQLLAESTLADLKRDAAIEAAGGKPAR

Sequences:

>Translated_197_residues
MAARKLQGIGLVLLVLLFAMMLYPVSLKVAATRSELTRVEREIDRARDNIRYLESELAVRASMRQLEQWNAEAFGYSAPD
AGQYLASERQLASLDRLPRARGANEVAPVLMAMVSPVAVPAAPKASPVADKPAVAAAKPVVLAQVDSGVRSDALPRMAPT
RRREQLKMIEDQLLAESTLADLKRDAAIEAAGGKPAR
>Mature_196_residues
AARKLQGIGLVLLVLLFAMMLYPVSLKVAATRSELTRVEREIDRARDNIRYLESELAVRASMRQLEQWNAEAFGYSAPDA
GQYLASERQLASLDRLPRARGANEVAPVLMAMVSPVAVPAAPKASPVADKPAVAAAKPVVLAQVDSGVRSDALPRMAPTR
RREQLKMIEDQLLAESTLADLKRDAAIEAAGGKPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21312; Mature: 21181

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARKLQGIGLVLLVLLFAMMLYPVSLKVAATRSELTRVEREIDRARDNIRYLESELAVR
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMRQLEQWNAEAFGYSAPDAGQYLASERQLASLDRLPRARGANEVAPVLMAMVSPVAVP
HHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCC
AAPKASPVADKPAVAAAKPVVLAQVDSGVRSDALPRMAPTRRREQLKMIEDQLLAESTLA
CCCCCCCCCCCCCHHHHCCHHEEHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLKRDAAIEAAGGKPAR
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AARKLQGIGLVLLVLLFAMMLYPVSLKVAATRSELTRVEREIDRARDNIRYLESELAVR
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMRQLEQWNAEAFGYSAPDAGQYLASERQLASLDRLPRARGANEVAPVLMAMVSPVAVP
HHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCC
AAPKASPVADKPAVAAAKPVVLAQVDSGVRSDALPRMAPTRRREQLKMIEDQLLAESTLA
CCCCCCCCCCCCCHHHHCCHHEEHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLKRDAAIEAAGGKPAR
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA