| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is murB
Identifier: 103487363
GI number: 103487363
Start: 1976289
End: 1977188
Strand: Reverse
Name: murB
Synonym: Sala_1879
Alternate gene names: 103487363
Gene position: 1977188-1976289 (Counterclockwise)
Preceding gene: 103487364
Following gene: 103487362
Centisome position: 59.11
GC content: 68.0
Gene sequence:
>900_bases GTGAGCGCAACCGCCACCCTGCCGGCCGTTCGCGGCAAGCTCACCCCGCAAGCCCCGCTCGCCCCGCTCGTCTGGTTCAA GTCGGGTGGCGCCGCCGACTGGCTGTTCGAGCCGAAGGACGTCGACGACCTCGCCGATTTCCTGCGCGACCTCGATCCGG CGATCCCGGTGATGGCGCTCGGCCTCGGCTCGAACCTCATCGTCCGCGACGGCGGATTTCCCGGCGTCGTCGTCCGGCTG GGCAAGGCTTTCGCCAAGGTGGAACCGATCGACGCCACCACATTGCGCTGCGGCGGCGGAGCGTCGGGCATTCTCGTTTC CTCGACCGCGCGCGACGCGGGGATTGCGGGGATGGAGTTCCTGCGTTCGATTCCCGGCACCGTCGGCGGCTTCGTGCGCA TGAACGGCGGCGCCTATGGCGGTGAGGTCAAGGATATATTGGTCGATTGCGACGTCGTGCTGCGCTCGGGCGAACGCAAG ACGCTCGCACTTGCCGACCTCGGCTACACCTATCGCCACAGCGAACTGCCCGAGGGCGCGGTGGTCGTCGGCGCGACCTT TCGTGGCCGGCCCGGCGCATCGGCGGCGATCCAGGCCGAGATGGACCGCATCTCGGCGAGCCGCGAGGCCTCGCAGCCGC TGCGTTCGAGAACCGGCGGCTCGACCTTCAAGAACCCCGCCGGGCACAAGGCCTGGCAACTGGTCGACGCGGCCGGGTGC CGCGGGCTGATGGTCGGCGGCGCGCAGGTCAGCGAGAAACACACCAATTTCCTGATCAATACCGGCGATGCGACGAGCGC CGATATCGAGGCATTGGGCGAAGAAGTCCGCCGCCGGGTGAAGGACAAGAGCGGCATCGAATTGCAGTGGGAGATTCAGC GCGTGGGTAAGGCCGAATGA
Upstream 100 bases:
>100_bases TTCCGTTCGTGTCGAGCGAAGTCGAGACACCCCGCGGCATAGCGCCCAGCCCGATGGGCATCTCGACTTCGCTCGATGCG AACGGGGAAGGGCTGGGGTC
Downstream 100 bases:
>100_bases GCCGGGGTCCGTGGCATGTCGCCGTCCTGATGGGCGGCTGGTCGGCCGAGCGCGAGGTGTCGTTGATGAGCGGCAAGGGC GTGGCCGACGCGCTCGAAAG
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSATATLPAVRGKLTPQAPLAPLVWFKSGGAADWLFEPKDVDDLADFLRDLDPAIPVMALGLGSNLIVRDGGFPGVVVRL GKAFAKVEPIDATTLRCGGGASGILVSSTARDAGIAGMEFLRSIPGTVGGFVRMNGGAYGGEVKDILVDCDVVLRSGERK TLALADLGYTYRHSELPEGAVVVGATFRGRPGASAAIQAEMDRISASREASQPLRSRTGGSTFKNPAGHKAWQLVDAAGC RGLMVGGAQVSEKHTNFLINTGDATSADIEALGEEVRRRVKDKSGIELQWEIQRVGKAE
Sequences:
>Translated_299_residues MSATATLPAVRGKLTPQAPLAPLVWFKSGGAADWLFEPKDVDDLADFLRDLDPAIPVMALGLGSNLIVRDGGFPGVVVRL GKAFAKVEPIDATTLRCGGGASGILVSSTARDAGIAGMEFLRSIPGTVGGFVRMNGGAYGGEVKDILVDCDVVLRSGERK TLALADLGYTYRHSELPEGAVVVGATFRGRPGASAAIQAEMDRISASREASQPLRSRTGGSTFKNPAGHKAWQLVDAAGC RGLMVGGAQVSEKHTNFLINTGDATSADIEALGEEVRRRVKDKSGIELQWEIQRVGKAE >Mature_298_residues SATATLPAVRGKLTPQAPLAPLVWFKSGGAADWLFEPKDVDDLADFLRDLDPAIPVMALGLGSNLIVRDGGFPGVVVRLG KAFAKVEPIDATTLRCGGGASGILVSSTARDAGIAGMEFLRSIPGTVGGFVRMNGGAYGGEVKDILVDCDVVLRSGERKT LALADLGYTYRHSELPEGAVVVGATFRGRPGASAAIQAEMDRISASREASQPLRSRTGGSTFKNPAGHKAWQLVDAAGCR GLMVGGAQVSEKHTNFLINTGDATSADIEALGEEVRRRVKDKSGIELQWEIQRVGKAE
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_SPHAL (Q1GRY1)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616924.1 - ProteinModelPortal: Q1GRY1 - SMR: Q1GRY1 - GeneID: 4082624 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1879 - NMPDR: fig|317655.9.peg.1807 - HOGENOM: HBG686573 - OMA: SKKHAGF - ProtClustDB: PRK13905 - BioCyc: SALA317655:SALA_1879-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 31358; Mature: 31227
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 172-172 ACT_SITE 221-221 ACT_SITE 291-291
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATATLPAVRGKLTPQAPLAPLVWFKSGGAADWLFEPKDVDDLADFLRDLDPAIPVMAL CCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE GLGSNLIVRDGGFPGVVVRLGKAFAKVEPIDATTLRCGGGASGILVSSTARDAGIAGMEF CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHH LRSIPGTVGGFVRMNGGAYGGEVKDILVDCDVVLRSGERKTLALADLGYTYRHSELPEGA HHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCE VVVGATFRGRPGASAAIQAEMDRISASREASQPLRSRTGGSTFKNPAGHKAWQLVDAAGC EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC RGLMVGGAQVSEKHTNFLINTGDATSADIEALGEEVRRRVKDKSGIELQWEIQRVGKAE CEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC >Mature Secondary Structure SATATLPAVRGKLTPQAPLAPLVWFKSGGAADWLFEPKDVDDLADFLRDLDPAIPVMAL CCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE GLGSNLIVRDGGFPGVVVRLGKAFAKVEPIDATTLRCGGGASGILVSSTARDAGIAGMEF CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHH LRSIPGTVGGFVRMNGGAYGGEVKDILVDCDVVLRSGERKTLALADLGYTYRHSELPEGA HHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCE VVVGATFRGRPGASAAIQAEMDRISASREASQPLRSRTGGSTFKNPAGHKAWQLVDAAGC EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC RGLMVGGAQVSEKHTNFLINTGDATSADIEALGEEVRRRVKDKSGIELQWEIQRVGKAE CEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA